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NECEvent2014_2_2_scaffold_842_4

Organism: NECEvent2014_2_2_Actinomyces_HPA0247-rel_65_243_partial

near complete RP 51 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 15 / 38 MC: 2
Location: comp(3703..3948)

Top 3 Functional Annotations

Value Algorithm Source
Integrase core domain protein (Fragment) n=1 Tax=Atopobium sp. ICM58 RepID=J3J6V3_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 28.0
  • Bit_score: 58
  • Evalue 3.20e-06
Integrase core domain protein {ECO:0000313|EMBL:EJN51707.1}; Flags: Fragment;; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Ato UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 28.0
  • Bit_score: 58
  • Evalue 4.50e-06

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Taxonomy

Atopobium sp. ICM58 → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 246
ATGAGCCACTGGCGCTGCACCCGTTATGTCGCGCTGCACCCGTTACGTCGCGCTGCACCTGAACAGAAGGGGTGTAATGCCTACGGTTCAGGTGCACTGCCCCTCATAACAAGTGAAAGTGTGGTCGGTGTGTGCAGAGGTGACTGCGTCGCACAGAGAGCTGGGCTGCCGCGCACAGAGGGTTGGACTACCTCGCACCCTATCCACAGCCCATTGTTCGTGTCGCTGGTTATCCACAGGGGTTGA
PROTEIN sequence
Length: 82
MSHWRCTRYVALHPLRRAAPEQKGCNAYGSGALPLITSESVVGVCRGDCVAQRAGLPRTEGWTTSHPIHSPLFVSLVIHRG*