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NECEvent2014_2_2_scaffold_356_7

Organism: NECEvent2014_2_2_Actinomyces_HPA0247-rel_65_243_partial

near complete RP 51 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 15 / 38 MC: 2
Location: comp(4779..5417)

Top 3 Functional Annotations

Value Algorithm Source
RsmD family RNA methyltransferase n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A4Y7_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 212.0
  • Bit_score: 418
  • Evalue 5.40e-114
  • rbh
RsmD family RNA methyltransferase {ECO:0000313|EMBL:EPD71319.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 212.0
  • Bit_score: 418
  • Evalue 7.60e-114
methyltransferase similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 182.0
  • Bit_score: 193
  • Evalue 4.70e-47

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Taxonomy

Actinomyces sp. HPA0247 → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGACCAGAATCGTCGCAGGTAGCGCCAAGGGACGAACCCTCGCCGTGCCCAAGTCCGGGACACGCCCCACGTCGGAGCGCGTGCGCGAGGCGCTTTTCTCTCGTCTCGACCATATGAACGTCCTGAATGGGACCGTCGTGCTGGATCTGTACGCCGGGACGGGTGCGCTCGGCCTCGAGGCGCTCTCGCGCGGTAGCGCTCATGCAACGCTCGTCGAGAAAGCGTCTGCGGCGGCGCGCGTCGCCTCCGCCAACGTGCGCTCGACCGGTCTGCCTGCGCGTGTCGTCACAGCTGATGCTCGTGCGTATCTTGCTGCGCGCACCGGCGAGGATCTGTGCGGAGACGTTGACCTTGTTTTCATCGACCCTCCCTACGACATTCCCGAGGCGGACATGACCGCCGTCCTGTCGCTCCTTGGCCCCTGGATCGGCCCCGATGCTCTCGTCGTCGTTGAGCGCTCGACCCGTGCGCCCGCGCCCACGTGGCCGTCCTTCCTCGTCCTGGAAGACCAGCGCACGTGGGGGGAAACCGTCGCCTATTTCGCGGGTCCGCCTCTGCCCGAGGAAGATCCTCAGGATGACACGAATGCTCCCCGAGAGGCCGAGGCCTCGTCGCCACATGCGGAGGATGCGCAATGA
PROTEIN sequence
Length: 213
MTRIVAGSAKGRTLAVPKSGTRPTSERVREALFSRLDHMNVLNGTVVLDLYAGTGALGLEALSRGSAHATLVEKASAAARVASANVRSTGLPARVVTADARAYLAARTGEDLCGDVDLVFIDPPYDIPEADMTAVLSLLGPWIGPDALVVVERSTRAPAPTWPSFLVLEDQRTWGETVAYFAGPPLPEEDPQDDTNAPREAEASSPHAEDAQ*