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NECEvent2014_2_2_scaffold_1471_1

Organism: NECEvent2014_2_2_Peptoniphilus_harei-rel_34_8

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 ASCG 12 / 38 MC: 1
Location: 2..439

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-70 {ECO:0000313|EMBL:CCK89609.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CCK89609.1};; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 145.0
  • Bit_score: 284
  • Evalue 9.00e-74
RNA polymerase sigma-H factor n=1 Tax=Clostridium difficile CD160 RepID=T3DSE1_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 145.0
  • Bit_score: 284
  • Evalue 6.40e-74
sigH; RNA polymerase factor sigma-70 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 145.0
  • Bit_score: 284
  • Evalue 1.80e-74

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 438
TATAAGGCAGTTAGAGATTTTGATGGAAGTAAGACCAATTCATTTAAATGTTTTGCGGAGATATGTATAACAAGACAAATAATAACTGCTATAAAAACTGCAACAAGACAAAAACATATACCTTTAAATTCATATGTTTCTTTGAATAAACCAATATATGATGAAGAGTCAGACAGAACACTTTTAGATATTATAGCTACAAGTATAGTAACAGATCCAGAAGAGCTTATAATTAGTAAAGAAGAGTTGAAAAATATAGAATCAAAAATGAACGAATTGTTAAGTGACTTGGAATTAGAAGTACTAGAATTATATTTAAATGGAAAGTCATACCAGTTTATAGCGGACAAGCTTAAAAGAGATGTAAAGTCAATAGATAACGCTTTACAAAGGGTTAAGAGAAAATTAGAAAAACATCTTGAAAACAGAAATGATTAA
PROTEIN sequence
Length: 146
YKAVRDFDGSKTNSFKCFAEICITRQIITAIKTATRQKHIPLNSYVSLNKPIYDEESDRTLLDIIATSIVTDPEELIISKEELKNIESKMNELLSDLELEVLELYLNGKSYQFIADKLKRDVKSIDNALQRVKRKLEKHLENRND*