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NECEvent2014_2_3_scaffold_57

Alias: 172_003_scaffold_57

Search features with annotation key words

Displaying items 31-55 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_57_31
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36198..36866)
DNA (669bp) protein (223aa)
Response regulator n=220 Tax=Clostridium difficile RepID=C9XJX9_CLODC rbh
two-component system response regulator
Response regulator receiver domain protein {ECO:0000313|EMBL:EFH07581.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pept
NECEvent2014_2_3_scaffold_57_32
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37026..39527)
DNA (2502bp) protein (834aa)
putative copper-transporting P-type ATPase (EC:3.6.3.4)
Copper-translocating P-type ATPase {ECO:0000313|EMBL:EQH98916.1}; EC=3.6.3.4 {ECO:0000313|EMBL:EQH98916.1};; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcace
Copper-translocating P-type ATPase n=70 Tax=Clostridium difficile RepID=T3GNK5_CLODC rbh
NECEvent2014_2_3_scaffold_57_33
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39811..40002)
DNA (192bp) protein (64aa)
Uncharacterized protein n=221 Tax=Clostridium difficile RepID=T3GJH4_CLODC
uncharacterised protein
Uncharacterized protein {ECO:0000313|EMBL:CCK94561.1}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_57_34
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40150..40392)
DNA (243bp) protein (81aa)
Uncharacterized protein n=30 Tax=Clostridium difficile RepID=D5Q3J7_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCK94562.1}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
conserved hypothetical protein
NECEvent2014_2_3_scaffold_57_35
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40604..42427
DNA (1824bp) protein (608aa)
GTP-binding protein n=211 Tax=Clostridium difficile RepID=C9XJY1_CLODC rbh
GTP-binding protein
GTP-binding protein BipA {ECO:0000313|EMBL:CCL22409.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diff
NECEvent2014_2_3_scaffold_57_36
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42517..43425)
DNA (909bp) protein (303aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclo
Thioredoxin reductase n=184 Tax=Clostridium difficile RepID=C9XJY2_CLODC rbh
thioredoxin reductase
NECEvent2014_2_3_scaffold_57_37
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43623..43736)
DNA (114bp) protein (38aa)
Putative membrane protein n=178 Tax=Clostridium difficile RepID=T2TKP3_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQE62725.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
NECEvent2014_2_3_scaffold_57_38
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44566..46047
DNA (1482bp) protein (494aa)
thrC; Threonine synthase (EC:4.2.3.1)
Threonine synthase {ECO:0000313|EMBL:CEJ98717.1}; EC=4.2.3.1 {ECO:0000313|EMBL:CEJ98717.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridiu
Threonine synthase n=94 Tax=Clostridium difficile RepID=T3GJD6_CLODC rbh
NECEvent2014_2_3_scaffold_57_39
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46057..46950
DNA (894bp) protein (298aa)
thrB; Homoserine kinase (HSK) (HK) (EC:2.7.1.39)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|
Homoserine kinase n=174 Tax=Clostridium difficile RepID=T3GIB7_CLODC rbh
NECEvent2014_2_3_scaffold_57_40
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47137..48135
DNA (999bp) protein (333aa)
Nitronate monooxygenase family protein n=212 Tax=Clostridium difficile RepID=C9XJY5_CLODC rbh
2-nitropropane dioxygenase
Nitronate monooxygenase family protein {ECO:0000313|EMBL:EQE62722.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl
NECEvent2014_2_3_scaffold_57_41
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(48290..48802)
DNA (513bp) protein (171aa)
Flavin reductase like domain protein n=145 Tax=Clostridium difficile RepID=T3GNE0_CLODC rbh
conserved hypothetical protein
Flavin reductase like domain protein {ECO:0000313|EMBL:EQE62718.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclos
NECEvent2014_2_3_scaffold_57_42
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49322..50257
DNA (936bp) protein (312aa)
CorA-like protein n=214 Tax=Clostridium difficile RepID=G6BCB3_CLODI rbh
cations transporter
CorA-like Mg2+ transporter family protein {ECO:0000313|EMBL:EQE62721.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pept
NECEvent2014_2_3_scaffold_57_43
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50349..52220)
DNA (1872bp) protein (624aa)
TPR repeat family protein n=110 Tax=Clostridium difficile RepID=T3GML6_CLODC rbh
putative multiprotein-complex assembly TPRrepeat-containing protein
Putative multiprotein-complex assembly TPR repeat-containing protein {ECO:0000313|EMBL:CCL22416.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Pepto
NECEvent2014_2_3_scaffold_57_44
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52410..53336
DNA (927bp) protein (309aa)
Membrane transport family protein n=164 Tax=Clostridium difficile RepID=T2TJE8_CLODI rbh
transporter
Putative malate transporter {ECO:0000313|EMBL:CDS86018.1}; Putative transporter {ECO:0000313|EMBL:CDS87353.1}; Transporter {ECO:0000313|EMBL:CKH22386.1}; TaxID=1496 species="Bacteria; Firmicutes; Clos
NECEvent2014_2_3_scaffold_57_45
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

53475..53621
DNA (147bp) protein (49aa)
Uncharacterized protein n=204 Tax=Clostridium difficile RepID=D5Q3I7_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQG75150.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
NECEvent2014_2_3_scaffold_57_46
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(53726..54271)
DNA (546bp) protein (182aa)
Acetyltransferase family protein n=2 Tax=Clostridium difficile RepID=T4ARL9_CLODI rbh
acetyltransferase
Putative acetyltransferase {ECO:0000313|EMBL:CBE05039.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
NECEvent2014_2_3_scaffold_57_47
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54303..54527)
DNA (225bp) protein (75aa)
Uncharacterized protein n=204 Tax=Clostridium difficile RepID=T3GI82_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE62712.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_57_48
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

54724..55848
DNA (1125bp) protein (375aa)
Uncharacterized protein n=21 Tax=Clostridium difficile RepID=T2UKD1_CLODI rbh
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CDS87357.1}; Uncharacterized protein {ECO:0000313|EMBL:CKH22485.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcace
NECEvent2014_2_3_scaffold_57_49
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56322..57146)
DNA (825bp) protein (275aa)
Uncharacterized protein n=151 Tax=Clostridium difficile RepID=G6BQ61_CLODI rbh
putative exported protein
Putative exported protein {ECO:0000313|EMBL:CDT15705.1}; Uncharacterised protein {ECO:0000313|EMBL:CKH22507.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcace
NECEvent2014_2_3_scaffold_57_50
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(57494..58549)
DNA (1056bp) protein (352aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphatesynthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS0
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=47 Tax=Clostridium difficile RepID=T3GJ50_CLODC rbh
NECEvent2014_2_3_scaffold_57_51
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(58732..59736)
DNA (1005bp) protein (335aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Pepto
RIP metalloprotease RseP n=180 Tax=Clostridium difficile RepID=T3GKQ6_CLODC rbh
putative membrane-associated peptidase, M50family
NECEvent2014_2_3_scaffold_57_52
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(59749..60903)
DNA (1155bp) protein (385aa)
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=28 Tax=Clostridium difficile RepID=DXR_CLOD6 rbh
NECEvent2014_2_3_scaffold_57_53
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(61067..61270)
DNA (204bp) protein (68aa)
Cro/C1-type HTH DNA-binding domain protein n=113 Tax=Clostridium difficile RepID=C9XJZ6_CLODC
transcriptional regulator
Cro/C1-type HTH DNA-binding domain protein {ECO:0000313|EMBL:EQG76397.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pep
NECEvent2014_2_3_scaffold_57_54
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

61607..62188
DNA (582bp) protein (194aa)
Uncharacterized protein n=10 Tax=Clostridium difficile RepID=Q185S0_CLOD6 rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ69017.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_57_55
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(62275..64086)
DNA (1812bp) protein (604aa)
Diguanylate cyclase domain protein n=40 Tax=Clostridium difficile RepID=T2TYA5_CLODI rbh
putative signaling protein
Diguanylate cyclase domain protein {ECO:0000313|EMBL:EQH98939.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostr
Displaying items 31-55 of 55 in total

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