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NECEvent2014_2_3_scaffold_77

Alias: 172_003_scaffold_77

Search features with annotation key words

Displaying items 31-52 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_77_31
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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35979..36926
DNA (948bp) protein (316aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_0073
Ribosomal protein L11 methyltransferase n=133 Tax=Clostridium difficile RepID=T3GE83_CLODC rbh
prmA; ribosomal protein L11 methyltransferase
NECEvent2014_2_3_scaffold_77_32
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36945..37703
DNA (759bp) protein (253aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
Ribosomal RNA small subunit methyltransferase E n=178 Tax=Clostridium difficile RepID=C9XLN3_CLODC rbh
hypothetical protein
NECEvent2014_2_3_scaffold_77_33
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37705..39003
DNA (1299bp) protein (433aa)
tRNA-i(6)A37 thiotransferase enzyme MiaB {ECO:0000313|EMBL:EQE60911.1}; EC=2.-.-.- {ECO:0000313|EMBL:EQE60911.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptoc
tRNA methylthiotransferase YqeV n=161 Tax=Clostridium difficile RepID=G6BZJ4_CLODI rbh
radical SAM protein
NECEvent2014_2_3_scaffold_77_34
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39046..39396
DNA (351bp) protein (117aa)
HIT domain protein n=208 Tax=Clostridium difficile RepID=C9XLN1_CLODC
histidine triad (HIT) protein
HIT domain protein {ECO:0000313|EMBL:EQE60943.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile
NECEvent2014_2_3_scaffold_77_35
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39559..39738
DNA (180bp) protein (60aa)
30S ribosomal protein S21 n=221 Tax=Clostridium difficile RepID=RS21_CLOD6
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridi
NECEvent2014_2_3_scaffold_77_36
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39768..40211
DNA (444bp) protein (148aa)
YqeY-like protein n=222 Tax=Clostridium difficile RepID=D5Q2K1_CLODI
rpsU; tRNA binding protein
YqeY-like protein {ECO:0000313|EMBL:EFH07724.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NA
NECEvent2014_2_3_scaffold_77_37
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40322..40819
DNA (498bp) protein (166aa)
Probale sensory protein n=194 Tax=Clostridium difficile RepID=C9XLM8_CLODC rbh
hypothetical protein
Putative transmembrane signaling protein,TspO/MBR family {ECO:0000313|EMBL:CCL22780.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.
NECEvent2014_2_3_scaffold_77_38
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41012..41575
DNA (564bp) protein (188aa)
Ribosomal subunit interface protein n=205 Tax=Clostridium difficile RepID=G6BCV3_CLODI rbh
sigma 54 modulation protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:EQE60990.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclost
NECEvent2014_2_3_scaffold_77_39
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41782..42024
DNA (243bp) protein (81aa)
Uncharacterized protein n=223 Tax=Clostridium difficile RepID=C9XLM6_CLODC
hypothetical protein
Putative sporulation protein YqfC {ECO:0000313|EMBL:EFH07727.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostrid
NECEvent2014_2_3_scaffold_77_40
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42037..43380
DNA (1344bp) protein (448aa)
Sporulation protein YqfD n=65 Tax=Clostridium difficile RepID=T3GIL0_CLODC rbh
spoIV; Stage IV sporulation protein
Putative stage IV sporulation protein {ECO:0000313|EMBL:CKH32508.1}; Stage IV sporulation protein {ECO:0000313|EMBL:CEJ99062.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pe
NECEvent2014_2_3_scaffold_77_41
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43319..44434
DNA (1116bp) protein (372aa)
PhoH-like protein n=28 Tax=Clostridium difficile RepID=U3WMD8_CLODI rbh
PhoH-like protein {ECO:0000313|EMBL:CCL22776.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T
PhoH-like protein
NECEvent2014_2_3_scaffold_77_42
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44491..44952
DNA (462bp) protein (154aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; P
Endoribonuclease YbeY n=209 Tax=Clostridium difficile RepID=YBEY_CLOD6 rbh
hypothetical protein
NECEvent2014_2_3_scaffold_77_43
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44958..45677
DNA (720bp) protein (240aa)
Membrane-associated kinase and phosphatase {ECO:0000313|EMBL:CKH32380.1}; EC=2.7.1.66 {ECO:0000313|EMBL:CKH32380.1};; Putative diacylglycerol kinase {ECO:0000313|EMBL:CEJ99059.1}; EC=2.7.1.- {ECO:0000
PAP2 superfamily protein n=208 Tax=Clostridium difficile RepID=C9XLM2_CLODC rbh
membrane-associated kinase and phosphatase
NECEvent2014_2_3_scaffold_77_44
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45796..46197
DNA (402bp) protein (134aa)
Cytidine deaminase {ECO:0000313|EMBL:EQE61002.1}; EC=3.5.4.5 {ECO:0000313|EMBL:EQE61002.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostri
Cytidine deaminase n=168 Tax=Clostridium difficile RepID=C9XLM1_CLODC
cytidine deaminase
NECEvent2014_2_3_scaffold_77_45
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46261..47154
DNA (894bp) protein (298aa)
GTPase Era n=187 Tax=Clostridium difficile RepID=ERA_CLOD6 rbh
era; GTP-binding protein
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="
NECEvent2014_2_3_scaffold_77_46
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47166..48545
DNA (1380bp) protein (460aa)
Magnesium transporter n=212 Tax=Clostridium difficile RepID=C9XLL9_CLODC rbh
Mg2+ transporter
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium d
NECEvent2014_2_3_scaffold_77_47
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48618..48773
DNA (156bp) protein (52aa)
YqzL-like family protein n=221 Tax=Clostridium difficile RepID=T3GF77_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL30671.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_77_48
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48739..49512
DNA (774bp) protein (258aa)
DNA repair protein RecO n=25 Tax=Clostridium difficile RepID=RECO_CLOD6 rbh
recO; DNA repair protein RecO (Recombination proteinO)
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1496 species="Bacteria; Firmicutes; Clostridi
NECEvent2014_2_3_scaffold_77_49
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49502..50104
DNA (603bp) protein (201aa)
Uncharacterized protein n=203 Tax=Clostridium difficile RepID=Q182C1_CLOD6 rbh
uncharacterised protein
Uncharacterized protein {ECO:0000313|EMBL:CCK87772.1}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_77_50
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50264..51142
DNA (879bp) protein (293aa)
glyQ; glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA syntheta
Glycine--tRNA ligase alpha subunit n=219 Tax=Clostridium difficile RepID=SYGA_CLOD6 rbh
NECEvent2014_2_3_scaffold_77_51
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

51142..53208
DNA (2067bp) protein (689aa)
glyS; Glycyl-tRNA synthetase beta subunit(Glycine--tRNA ligase beta subunit) (GlyRS) (EC:6.1.1.14)
Glycine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255}; EC=6.1.1.14 {ECO:0000255|HAMAP-Rule:MF_00255};; Glycyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255}; Short=GlyRS
Glycine--tRNA ligase beta subunit n=29 Tax=Clostridium difficile RepID=SYGB_CLOD6 rbh
NECEvent2014_2_3_scaffold_77_52
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(53374..54921)
DNA (1548bp) protein (516aa)
Nitrite/sulfite reductase {ECO:0000313|EMBL:CKH32105.1}; EC=1.8.7.1 {ECO:0000313|EMBL:CKH32105.1};; Putative nitrite/sulphite reductase {ECO:0000313|EMBL:CDS85417.1}; EC=1.8.1.2 {ECO:0000313|EMBL:CDS8
Nitrite/Sulfite reductase ferredoxin-like half domain protein n=137 Tax=Clostridium difficile RepID=C9XLL4_CLODC rbh
nitrite/sulfite reductase
Displaying items 31-52 of 52 in total

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