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NECEvent2014_2_3_scaffold_122_12

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(12674..13672)

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid transport system / permease component family protein n=5 Tax=Clostridium difficile RepID=T3IJI6_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 332.0
  • Bit_score: 631
  • Evalue 3.70e-178
  • rbh
rbsC; ABC-type transport system, ribose-specificpermease similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 332.0
  • Bit_score: 631
  • Evalue 1.10e-178
ABC-type transport system, ribose-specific permease {ECO:0000313|EMBL:CAJ67124.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 332.0
  • Bit_score: 631
  • Evalue 5.20e-178

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 999
ATGAGTTCAATAACTAAGCATAAAGAAGAAAAATCTTCTCCATTATTGACAAAATTAACAAGTGTATTTAGAGACCAAGGGAGTGCAGCTGTAGGACTTGTAATAATTTTTATAATAATGAGTGTAGCTTCATCTAACTTTTTAACTTTAGATAATTTAATTAATGTTGGAAGACAAATATCAATAAATGCAATACTTGCAGTAGGTATGACATTTGTAATAATTACAGGAGGAATAGATTTAAGTGTAGGAGCAGTAATTGCTTTAGTAGGTACATTTTGGGCTACAACAGTAGTGAATTATAATGCACCTATATGGGTAGGTATGATACTTGCATTAACAATAGGGACAATATTAGGAGTCATAAAAGGTGCAATTATTTCAACACAAAAACTACCTCCATTCATTGTAACTTTAGCCATGTTAACGATAATAAGTGGGGCAAGCTTTGTATTTACAGGAGGAAGACCTATATCAGTAAATACAGATGCATTTAAGATGCTCGGTAGAGGATATATTGGACCAATACCAATACCAGTTATAATTATGATTATAGTTGTAATAGCAGGACATTTTCTATTAAAAAGAACTAATTTTGGACGTCCTGTACATGCAGTAGGTGGAAATGAAGAGGCCGCTAGATTATGTGGAGTAAAAGTAAATAAAGTTATAGTAAAAGTATACGCACTAGCTGGACTACTAACAGCATTAGCTGGGATAATACTATCATCACGTTTGGCATCAGGTTCACCAACTGTTGGAGATGGAGCAGAATTGGATGCTATAGCAGCCGTTGTGCTTGGTGGCACTAATATGATGGGTGGTTCTGGTTCTATAGTAGGTACATGTATAGGTGTCGGAATAATAGGAATATTAGGAAATGGATTAAACTTATTAAGTGTATCTTCATATAATCAAATGATTATAAAAGGTTTGGTAATGTTATTTGCTATATGGATAAATAATATAAAATTAAAAAAATCAGCTAAATCTAAATAG
PROTEIN sequence
Length: 333
MSSITKHKEEKSSPLLTKLTSVFRDQGSAAVGLVIIFIIMSVASSNFLTLDNLINVGRQISINAILAVGMTFVIITGGIDLSVGAVIALVGTFWATTVVNYNAPIWVGMILALTIGTILGVIKGAIISTQKLPPFIVTLAMLTIISGASFVFTGGRPISVNTDAFKMLGRGYIGPIPIPVIIMIIVVIAGHFLLKRTNFGRPVHAVGGNEEAARLCGVKVNKVIVKVYALAGLLTALAGIILSSRLASGSPTVGDGAELDAIAAVVLGGTNMMGGSGSIVGTCIGVGIIGILGNGLNLLSVSSYNQMIIKGLVMLFAIWINNIKLKKSAKSK*