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NECEvent2014_2_3_scaffold_122_23

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(23119..24213)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix family protein n=156 Tax=Clostridium difficile RepID=T3IGQ0_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 364.0
  • Bit_score: 717
  • Evalue 9.70e-204
  • rbh
Transcriptional regulator, HTH-type similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 364.0
  • Bit_score: 717
  • Evalue 2.70e-204
Transcriptional regulator, HTH-type {ECO:0000313|EMBL:CCL22472.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclost similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 364.0
  • Bit_score: 717
  • Evalue 1.40e-203

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1095
ATGAATGAATTAAACATCGCAAAAACGCTGATTTTAAAGCGTAAAGAAAAAGGAATTACACAAGATGAACTTGCAAATTATATAGGCGTTTCTAAAGCTTCTGTATCTAAATGGGAAACTGGACAAAGCTATCCTGACATAACCTTTTTACCGCAACTCGCGACATATTTCAACATTACCGTTGATGAGTTAATATGTTATGAACCTCAAATGATGAAGGAAGATATTAATAAACTGTATAATAAACTGTGCAAAGACTTTACGGTTAAACCATTTGATGAAGTCATGGATGAAATAAGAGAAATCATAAAAAAATATTATTCATGTTTTCCTTTGATTTTTCGGATGGGTCTTTTAATAGTTAATCACTATGATATTGTAGATGAAAAAAAGCGTGAACTATTAATTAGTGAAGCATTAGAAATATTTATTCGTATACAGGAAACTTGTAATGACATAGATATTTGCCGTCAAGCAAAAAGTATGGAGGCAACTTGTTATATATTGTTAAATCAACCCATACAAGTGATTGATTTATTGCAAAACAGCAATTTTCCCATGATAAATGAATCTATACTTCTTGCACAGGGGCAAATGATGAATGGTCAAATGGATGAAGCGAGAGAAACATTTCAACTTGGTGCATATCAGAACCTTATATCATTAGTCCAAAATCTAGTGGGTATTTTGCAAAATGCAGATAAATTACAAATGAAGGAAATAGAAAGACGTATTCTAGCAATTTCAGATATATTTGAGCTTGATACATTATCTCCTGCTATTATGCTTTCTTCATATTTAACACAGGCACAAATTAATTTAATACATGGTGATAATGAAGGAGCTATTAAATCATTACGAAAATATGTAGATTTAGCAACACGTGATATATACCCAATTATAATACATGGGGATGACTTTTTTAATAAACTTGACAGATGGATTTCTGAAATTGGAACAGGTATTACACGTGATGATACAATCGTAAAAGCAGGTATTGTTGCTGCTATTAAAAATAATCCAATGTTTTCTGTATTAAGTGAAAACAAAGAATACAAATTTCTTATAGAAAAATTATCTTTATTGGAGGAATAA
PROTEIN sequence
Length: 365
MNELNIAKTLILKRKEKGITQDELANYIGVSKASVSKWETGQSYPDITFLPQLATYFNITVDELICYEPQMMKEDINKLYNKLCKDFTVKPFDEVMDEIREIIKKYYSCFPLIFRMGLLIVNHYDIVDEKKRELLISEALEIFIRIQETCNDIDICRQAKSMEATCYILLNQPIQVIDLLQNSNFPMINESILLAQGQMMNGQMDEARETFQLGAYQNLISLVQNLVGILQNADKLQMKEIERRILAISDIFELDTLSPAIMLSSYLTQAQINLIHGDNEGAIKSLRKYVDLATRDIYPIIIHGDDFFNKLDRWISEIGTGITRDDTIVKAGIVAAIKNNPMFSVLSENKEYKFLIEKLSLLEE*