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NECEvent2014_2_3_scaffold_196_8

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 8868..10004

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transport system, glycine betaine/carnitine/choline ATP-binding protein {ECO:0000313|EMBL:CAJ67733.1}; EC=3.6.3.- {ECO:0000313|EMBL:CAJ67733.1};; TaxID=272563 species="Bacteria; Firmicutes; C similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 378.0
  • Bit_score: 727
  • Evalue 1.40e-206
Glycine betaine/L-proline transport ATP binding subunit n=156 Tax=Clostridium difficile RepID=C9XMD0_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 378.0
  • Bit_score: 727
  • Evalue 9.70e-207
  • rbh
glycine/betaine/carnitine/choline ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 378.0
  • Bit_score: 727
  • Evalue 2.70e-207

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1137
ATGATAGAGATAAGAAATGTAACAAAAAAAATAGGAAATAATGTTATATTAGATGATATTTCTCTAGTTGTAGAAACAGGTACATTGGTAGTTTTGATTGGTTCAAGTGGTTGTGGAAAGACTACTACTTTGAAGCTTATAAACAAATTAATAAAACCTACATCTGGTGAGATATATATTAATGGCAAACCAATTTCTCAGGAAAATGAAATAGAGCTTAGAAGAAAAATAGGATATGTTATACAGAACACAGGCCTATTCCCTCATCTTACAATAAAAGAAAATATAGAGCTAATTCCACGCCTAAAAAAGGAAAAATCCGTTGAAGAAATTGAAAAAAGAACATTGCAACTACTTGAGATGGTAGGACTTGATAGTGATGAATTTTTGAATAAGTATCCTTCAGAACTTAGTGGTGGACAGCAACAAAGAATCGGTGTTGCAAGAGCCATTGCTACTGATGCTGAAATAATATTGATGGATGAGCCTTTTAGTGCTTTAGACCCAATAACGAGAACATCTTTACAAGAACAATTATTTTCTCTTCAAGATGAATTGAAAAAAACTATAATATTTGTAACGCATGATATGGATGAGGCTTTAAAGATAGCTGATAAAATTTGTATTATGAAGGATGGAAGAATAGCACAATATGATACTCCCGAAAATATACTTAGAAAGCCTGCAAATGACTTTGTAAAAGATTTTATCGGAGAAGATAGAGTTTGGGATAATCCAGAATATATAAAAGCAAGAGATATTATGATAAAAAATCCTATTGCTGTTAATTCTACTAGAACTGTAACTCAAGGAATAGAAATTATGAGAACGAGTAAGGTTGATAGCTTACTAATTATAGATAGAGCAAAAACATTAAAAGGTATTGTTACTGTAAAAGATATGAAAGATATTGATGATAAGTCAATATTACTTGCTGATATTATGTCAAGTGAGCCTTTGCATGTAAATGAAGGTGATAATTTAGTAGAAATACTAAATGTAATGAATCGTAATTCGGTTGGATATATTCCGGTTATTTCTGATGAAAATAAACTGGTAGGGCTTATTACTAGAAGTAGTTTACTTTCTGTTTTAAGTGAACAATTCTTAGAAATGGAGGTGAGTGTTCTTGGCTAA
PROTEIN sequence
Length: 379
MIEIRNVTKKIGNNVILDDISLVVETGTLVVLIGSSGCGKTTTLKLINKLIKPTSGEIYINGKPISQENEIELRRKIGYVIQNTGLFPHLTIKENIELIPRLKKEKSVEEIEKRTLQLLEMVGLDSDEFLNKYPSELSGGQQQRIGVARAIATDAEIILMDEPFSALDPITRTSLQEQLFSLQDELKKTIIFVTHDMDEALKIADKICIMKDGRIAQYDTPENILRKPANDFVKDFIGEDRVWDNPEYIKARDIMIKNPIAVNSTRTVTQGIEIMRTSKVDSLLIIDRAKTLKGIVTVKDMKDIDDKSILLADIMSSEPLHVNEGDNLVEILNVMNRNSVGYIPVISDENKLVGLITRSSLLSVLSEQFLEMEVSVLG*