ggKbase home page

NECEvent2014_2_3_scaffold_222_9

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(8156..9571)

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator (EC:2.6.1.39) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 471.0
  • Bit_score: 935
  • Evalue 4.80e-270
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CAJ70252.1}; EC=2.6.1.39 {ECO:0000313|EMBL:CAJ70252.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococ similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 471.0
  • Bit_score: 935
  • Evalue 2.40e-269
Transcriptional regulator, GntR family n=18 Tax=Clostridium difficile RepID=Q180J8_CLOD6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 471.0
  • Bit_score: 935
  • Evalue 1.70e-269
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1416
ATGTGGATTACGATTAATAGAAATAGTAATATATCATTATCAAGACAAATTTATTGTGAGATAAAAGATATGATTCTGGATGGAAGCTTAAAGTTTGAGCAAAAACTGCCATCATCTAGGACTTTATCAAAAGAACTATCTGTATCTCGTAATACAGTTTTAGATGCATATAATCAATTAATTGCAGAAGGATATTTGGAAACAAGGAATGGATATGGAACAATTGTAGCTAAAGGAATATCAGGGCATAAAGTTGATTTTAAGTTAAATGATACTTTTAGAGATGAAAAAGATTTACATACTAATAAACAAAAAAATTATATAGATTTTCGTTCAGGAGTTCCAGAATTAAAACTATTTCCACGCAAAGAACTTTCAAAGCTATATAAACAAATACTGTATGATTTATCAGATTCGGATTTCAGATATGGAAGTACAGCTGGTGTATGGGTTTTAAGAGTGGAAATATCTAAGTATTTATTTCGTACTAGAGGAATTAGATGTAATCCCAAAAACATTATGATTGTTTCTGGTTCAACACAAGGTTTATCTTTAATTTCACAGCTTTTATACAAAAGTAATAAAAAGGTTGCTGTAGAAGACCCTATTCATAAAGGCTTATTAAAGGTTATTTCATCTATTGGATATTCAGTTGTTGGAATTAAAGTAGATGATAAGGGAATGAATACCAACTTAATAAAATCAATAAAGGGGATTTCTTTTGTTTATACTACACCTTCTCATCAATACCCATTAGGAGGGATTTTACCTATTCAAAGAAGACTAGAGCTTATTAAATGTGCAACAGAGAATGATTACTATATAATTGAAGATGATTATGATAGTGAATTTAGATATGAGGGTCAACCAATTAGTTCTCTTTATGAACTTAGCCCAAATAAAGTAATTTACATAGGTTCTTTTAGTAAAATATTATCTCCAGCTATTCGTGTTGGATTTATGTTATTACCAGACAATATTTTAGAAAGCTATAAAACCTTAAAAATGTACTCTGATGTTCATACAGAAACAATATTGCAACATGTATTAGCTGAATTTATTGGAAATGGAGGTTTAGAGAAGTACATATTTAGAATGAAGAAGTTGTACAATAGAAAACGTAAGTACCTCATAAAAGTTTTAAACACGGAATTTAAAAATGAATTTAAAATAAAAGGTGAAGCAGCAGGGCTTCATATAGTTGCTCATTTCTATAATGTTAAATTTACGGAAAGTTTAATTCATAAAATTTTTGAAGCAGGTATAAAAGTTTATCCTATACAACAATATGCAATTGAGAATATATTAGAATATGACCATGAAATTATACTAGGTTATGCTCATCTTAGTTTTGATGAAATTGAAAAAGGTGTAAAAATACTCAGCAAAATAATACATATGAATCAAGGTACATAG
PROTEIN sequence
Length: 472
MWITINRNSNISLSRQIYCEIKDMILDGSLKFEQKLPSSRTLSKELSVSRNTVLDAYNQLIAEGYLETRNGYGTIVAKGISGHKVDFKLNDTFRDEKDLHTNKQKNYIDFRSGVPELKLFPRKELSKLYKQILYDLSDSDFRYGSTAGVWVLRVEISKYLFRTRGIRCNPKNIMIVSGSTQGLSLISQLLYKSNKKVAVEDPIHKGLLKVISSIGYSVVGIKVDDKGMNTNLIKSIKGISFVYTTPSHQYPLGGILPIQRRLELIKCATENDYYIIEDDYDSEFRYEGQPISSLYELSPNKVIYIGSFSKILSPAIRVGFMLLPDNILESYKTLKMYSDVHTETILQHVLAEFIGNGGLEKYIFRMKKLYNRKRKYLIKVLNTEFKNEFKIKGEAAGLHIVAHFYNVKFTESLIHKIFEAGIKVYPIQQYAIENILEYDHEIILGYAHLSFDEIEKGVKILSKIIHMNQGT*