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NECEvent2014_2_3_scaffold_242_3

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 873..1502

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L3 n=185 Tax=Clostridium difficile RepID=RL3_CLOD6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 209.0
  • Bit_score: 415
  • Evalue 4.50e-113
  • rbh
rplC; 50S ribosomal protein L3 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 209.0
  • Bit_score: 415
  • Evalue 1.30e-113
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridi similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 209.0
  • Bit_score: 415
  • Evalue 6.30e-113

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 630
ATGAAAGGAATATTAGGCAAAAAAGTTGGTATGACTCAAATATTCACTGATAAAGGTGTAGTTATACCTGTAACAGCTGTTGAAGCAGGGCCTATGGTCGTTACTCAAATAAAAACAGTTGATAAAGATGGATACAATGCTATACAAATAGGTTTTGAAGATGCTAAAGAAAAAGCTTTAAACAAACCTAAAAAAGGACATTTAGCTGCTGCTAATGTTTTAAAGAAACATTTAAAAGAATTTAGAGTAGATTCTGTAGAAGGATACACAGTAGGACAAGAAATAAAAGCTGATGTATTTGAAGCAGGTGCAAAAATAGATGTTACTGGAATAAGTAAAGGTAAGGGATTCCAAGGTCCAATAAAAAGACATGGACAAAGTAGAGGTCCTGAAACTCACGGTTCTAGATACCACAGAAGACCAGGTTCAATGGGAGCTTGTTCTTACCCAGGTAGAGTATTTAAAAACAAAAAATTAGCTGGACATATGGGAAGCGTAAAGGTAACAGTTCAAAACTTAGAGGTTGTTAAAGTAGATGCTGACAAGAACCTTATATTAGTTAAAGGAGCTATACCAGGAGCTAAAGGTTCAGTAGTAACTATAAAAGAAGCTATAAAGGTTTCTAAATAA
PROTEIN sequence
Length: 210
MKGILGKKVGMTQIFTDKGVVIPVTAVEAGPMVVTQIKTVDKDGYNAIQIGFEDAKEKALNKPKKGHLAAANVLKKHLKEFRVDSVEGYTVGQEIKADVFEAGAKIDVTGISKGKGFQGPIKRHGQSRGPETHGSRYHRRPGSMGACSYPGRVFKNKKLAGHMGSVKVTVQNLEVVKVDADKNLILVKGAIPGAKGSVVTIKEAIKVSK*