ggKbase home page

NECEvent2014_2_3_scaffold_242_15

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 6529..7071

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L5 n=183 Tax=Clostridium difficile RepID=C9XIK2_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 180.0
  • Bit_score: 355
  • Evalue 2.80e-95
  • rbh
rplE; 50S ribosomal protein L5 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 180.0
  • Bit_score: 355
  • Evalue 7.90e-96
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 180.0
  • Bit_score: 355
  • Evalue 3.90e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 543
ATGGCTTCTAGATTACAAGAAAAATACATGAAAGAAGTTGCTCCTGCTTTAATGGAGAAATTTGGATACAAAAACGTAATGGAGATACCTAAGTTAAATAAAATAGTTATTAACATGGGTATAGGTGACGCTAGAGAAAATCCAAAAGGATTAGAAAAAGGCGTTGAAGAATTAGAAATGATATCAGGACAAAAGCCTGTTATAACTAAAGCTAGAAAATCTGTTGCTAACTTCAAATTAAGAGAAGGAATGCCAATAGGAACAAAAGTTACATTAAGAGCTGACAAAATGTTCTACTTCATGGACAAATTAGTTTCAGTTTCTTTACCAAGAGTTAGAGACTTTAGAGGAGTTAACCCTAATGCTTTTGATGGTAGAGGAAATTATGCTTTAGGAGTTAAAGAACAATTAATATTCCCTGAAATAGAATATGATAAAATAGATAAAGTAAGAGGAATGGATATAATATTTGTTACTACAGCAAAAACTGACGAAGAAGCTCGTGAATTATTAAAATTATTAGGAATGCCATTTTCTAAGTAA
PROTEIN sequence
Length: 181
MASRLQEKYMKEVAPALMEKFGYKNVMEIPKLNKIVINMGIGDARENPKGLEKGVEELEMISGQKPVITKARKSVANFKLREGMPIGTKVTLRADKMFYFMDKLVSVSLPRVRDFRGVNPNAFDGRGNYALGVKEQLIFPEIEYDKIDKVRGMDIIFVTTAKTDEEARELLKLLGMPFSK*