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NECEvent2014_2_8_scaffold_1037_2

Organism: NECEvent2014_2_8_Eggerthella_1_3_56FAA-rel_64_4_partial

partial RP 14 / 55 BSCG 8 / 51 ASCG 2 / 38 MC: 1
Location: comp(1648..2256)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 54 subunit, RpoN n=3 Tax=Bacteria RepID=C8WN98_EGGLE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 150.0
  • Bit_score: 296
  • Evalue 1.70e-77
RNA polymerase sigma 54 subunit RpoN similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 150.0
  • Bit_score: 296
  • Evalue 4.90e-78
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EGC88369.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HG similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 150.0
  • Bit_score: 296
  • Evalue 2.40e-77

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Taxonomy

Eggerthella sp. HGA1 → Eggerthella → Eggerthellales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGTCGCTATCCATCGGTATCGTCGGTCTGCCGAACGTCGGCAAGTCCACGCTGTTCACGGCCCTCACGAACAAGGGCGGCCTCGCGGCCAACTACCCGTTCGCCACCATCGAGCCCAACGTGGGCGTGGTGCCCGTGCCCGACGCGCGCCTGGACGCGCTGGCGAACATCGACCAACGGCGCCAGACGCTCCATCGGTTCGGCGTGTATCTGGCCGAGGTCCAATACGATTTCTTCATGGGCGGCGAGGCGCGGATGCGCCCGCTCACCATGCAGCAGGCCGCCGATGCGCTGGGCGTGCATGTGTCCACCATCAGCCGCACGGTGCAGGACAAGTACGCCCTCACCCCGTGGGGCGTGTTCCCGCTCAAGCACTTCTTCTCAAGTTCGGTCGCCTGCACGGCCGAGGAGCGCCGCCATGCGCTGTCGTCGCTTGCCATCAAAGACCGCATCAAAGACCTGGTGGCCCAAGAGGACCGTCGCACGCCTTTGAGCGACGCGACGATCACCGCCATCCTGAACGGCGAGGGCGTGGACATCAAACGGCGAACCGTGGCGAAGTACCGCGAGGCGCTGGGCATCGGCCGGCAGTCGCAGCGAAGACGGTAA
PROTEIN sequence
Length: 203
MSLSIGIVGLPNVGKSTLFTALTNKGGLAANYPFATIEPNVGVVPVPDARLDALANIDQRRQTLHRFGVYLAEVQYDFFMGGEARMRPLTMQQAADALGVHVSTISRTVQDKYALTPWGVFPLKHFFSSSVACTAEERRHALSSLAIKDRIKDLVAQEDRRTPLSDATITAILNGEGVDIKRRTVAKYREALGIGRQSQRRR*