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NECEvent2014_2_8_scaffold_3200_1

Organism: NECEvent2014_2_8_Eggerthella_1_3_56FAA-rel_64_4_partial

partial RP 14 / 55 BSCG 8 / 51 ASCG 2 / 38 MC: 1
Location: comp(156..314)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix family protein n=1 Tax=Clostridium difficile F501 RepID=T4BD56_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 52.0
  • Bit_score: 105
  • Evalue 1.50e-20
Helix-turn-helix family protein {ECO:0000313|EMBL:EQI08012.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridi similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 52.0
  • Bit_score: 104
  • Evalue 6.00e-20
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 97.8
  • Coverage: 45.0
  • Bit_score: 88
  • Evalue 5.20e-16

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 159
GTGCGTTTTGCAGGCAATGCGCACGAGCTCGCGCAGCGGTGCGGCATGAAGCAGAGCGCGTTCGCCCGGCTGGAGTCCGGCAACGCCAACCCCACGCTCGAAACGCTCAAGCGCGTGGCCGAGGGTCTCGGCAAGCAGCTGCGCATCAGTTTCGTCTAG
PROTEIN sequence
Length: 53
VRFAGNAHELAQRCGMKQSAFARLESGNANPTLETLKRVAEGLGKQLRISFV*