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NECEvent2014_2_8_scaffold_1363_1

Organism: NECEvent2014_2_8_Veillonella_parvula-rel_39_106

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 8
Location: comp(3..1358)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 452.0
  • Bit_score: 912
  • Evalue 2.10e-262
DNA-directed RNA polymerase subunit beta n=16 Tax=Veillonella RepID=F5KXG0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 439.0
  • Bit_score: 887
  • Evalue 6.70e-255
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 439.0
  • Bit_score: 887
  • Evalue 1.90e-255

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Taxonomy

Veillonella dispar → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1356
ATGGTAGACCAGTGTGTTTTGATAGGGGTGAAAGCAAATATGTTCAAACCTGAACAGGTAGGCAAACGAACTCGTTATACGTACGCTAAAATTAACGAAGTTATCAAGATGCCGCATTTATTGGACATTCAGCGTAAATCGTATGAGTGGTTCTTGGAGAGTGGTTTACAAAATATTTTCAACGATATTTCTCCGATTAAAGACAATTCAGGTAATCTAGTACTTTCTTTTGAAGGCTTCAGCTTAGGTGAACCTAAGTATGATATTAATGAATGTAAAAATCGTGATGCTACTTACGCAGCACCACTTCGTGTAAATATTCGCTTGGTAAATAATGATCCAGAAAATATGGACATTAAAGAACAAGAAGTATTCATGGGCGATTTCCCATTGATGACAGATACAGGTACTTTCATCATCAATGGTGCAGAACGTGTTATCGTATCCCAATTGGTACGTTCTCCAGGCGTTTACTACAATAAAGAAATCGATACGATGGGTAACCGTTTGTATGATTCCACAGTTATTCCTAACCGTGGTGCATGGATTGAACTTGAAACAGATGCTAGTGAAGTGGTAGCTGTTCGTATCGACCGTAACCGTAAATTACCAGCCACTGTATTGGTACGTGCATTAGGTTGGGATACGAATGAAAGTATCCTAGACCTCTTCTGGAATGGTAAAACTGATGAGGATGGTTTACCAGTATATGATGAACGCATCGTTCGTACATTAGAAAAAGATACAACTCAATCTGCTGATGAAGCATTGGTTGAAATCTATAAAAAATTACGTCCAGGTGAGCCTCCTACTGTAGAGTCTGCTCGCAACTTGTTCGATAACTTGTTCTTCGATGCACGCCGTTATGACTTGGCGCGCGTTGGTCGTTACAAATTGAACAAAAAACTTGGCTGGCGCCAACGTATGTTGGGTCAAACATTGGCTCAACCAATTGTAGATCCAGAAACTGGCGAAATTATCCTTGATGCAGGCGTACAGGTTGGGGAAGAACAACTTGATATCGTTGCTAATAGCCATGTATTCGATGGTGAAGGTTTTGCTGAATTCTACATCGTAAATAATGATGGTGTAGAGTCTAAAGTTATCTGTAATAATTGCAACTTACCATATGATCACCGTACAGTAACACGTGAAGACATGATCGCTAACATTTCTTATTTGCTCAACCTTATGGATGGTGCAGGTCATACAGATGATATCGACCACTTGGGTAACCGTCGCCTTCGTTGCGTAGGCGAATTGTTGCAAAACCAATTCCGTATCGGTTTAACTCGTATGGAACGTGTTGTTCGTGAGCGCATGACAATTCAAGAAACTGAATCCATTACGCCTCAA
PROTEIN sequence
Length: 452
MVDQCVLIGVKANMFKPEQVGKRTRYTYAKINEVIKMPHLLDIQRKSYEWFLESGLQNIFNDISPIKDNSGNLVLSFEGFSLGEPKYDINECKNRDATYAAPLRVNIRLVNNDPENMDIKEQEVFMGDFPLMTDTGTFIINGAERVIVSQLVRSPGVYYNKEIDTMGNRLYDSTVIPNRGAWIELETDASEVVAVRIDRNRKLPATVLVRALGWDTNESILDLFWNGKTDEDGLPVYDERIVRTLEKDTTQSADEALVEIYKKLRPGEPPTVESARNLFDNLFFDARRYDLARVGRYKLNKKLGWRQRMLGQTLAQPIVDPETGEIILDAGVQVGEEQLDIVANSHVFDGEGFAEFYIVNNDGVESKVICNNCNLPYDHRTVTREDMIANISYLLNLMDGAGHTDDIDHLGNRRLRCVGELLQNQFRIGLTRMERVVRERMTIQETESITPQ