ggKbase home page

NECEvent2014_2_8_scaffold_2109_2

Organism: NECEvent2014_2_8_Veillonella_parvula-rel_39_106

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 8
Location: 1372..2325

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BPK0_VEIPT similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 347.0
  • Bit_score: 576
  • Evalue 2.30e-161
  • rbh
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 89.8
  • Coverage: 342.0
  • Bit_score: 596
  • Evalue 6.10e-168
Pseudouridine synthase {ECO:0000313|EMBL:ACZ25307.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain AT similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 347.0
  • Bit_score: 576
  • Evalue 3.30e-161

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Veillonella parvula → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 954
ATGGCGCGAAAAACACATCGTCCTGATGATATTCTGTGGACCGTGACCGCTGTAGATATAGACGCTGTGCTTAGTCAGAAATATGCAAAACAAAATTTGTCTAATAACGGTCGAGACGTATTTAGTAGCAGTCGAGGTATATCGAGTAGCAATCAAGACATGTCAAGTGGTGATCTAGAACATACTGGCGAAGCATGTGATATTTCACTCGGTGAAGTGTTAGATACTAAATATCCTGCAATCTCCGTAGACGATGAGATCTGGATTGCTATGGCTAAAGAGAAGATTGACCACGATCCAATTGAAATGGACTTATCCGTTTTATACGAAGACGAGGATCTTTTTATTGTGGATAAGCCAAGTGGTGTGACGGTGAACTCTAAAGATCGACTATCTCTTGCCAATGGTGTGGCGCACTATTTTAAAGAACATGGTATCAAGCGAAAGGTACGTTTCTTGAACCGTTTAGATCGAGATACGACGGGCTGTATTGTCATTGCAAAAAGCGGTCTAGCTCAAAGTCTTTATCAACAACAAATGGATGATAACACCTTTGAAAAGTGGTATATGGCTACTGTAGAAGGCATTGTAGAAGCTGATGAGGATACTTTAGTATTCCCTATGGAACGCAGTGCTGATGGTATTCATTACGAAGTAAATGCAAAGGGCAAAGAGACTCGCACAGATTTTTCCGTCCTATGTAGACATTCTTCCCAGCCTGTGGATAACTCTGTGAATAAGTCTGAAAATTCTGTGGATATAGGACTAAAAAATGTGGATATAGAATTAGTAGATGTGGATAAAAATAATCTAAATGTGGACAAAACTGTGTATAAGTCCAATAAATGTGGATATACTGAGGTTTTAGTTCGTTTGTACACAGGGAAAACACATCAAATTCGAGTAGCTTTCAGCCATATAGGGCACCCTCTTGTAGGAGATACCTTATACGGT
PROTEIN sequence
Length: 318
MARKTHRPDDILWTVTAVDIDAVLSQKYAKQNLSNNGRDVFSSSRGISSSNQDMSSGDLEHTGEACDISLGEVLDTKYPAISVDDEIWIAMAKEKIDHDPIEMDLSVLYEDEDLFIVDKPSGVTVNSKDRLSLANGVAHYFKEHGIKRKVRFLNRLDRDTTGCIVIAKSGLAQSLYQQQMDDNTFEKWYMATVEGIVEADEDTLVFPMERSADGIHYEVNAKGKETRTDFSVLCRHSSQPVDNSVNKSENSVDIGLKNVDIELVDVDKNNLNVDKTVYKSNKCGYTEVLVRLYTGKTHQIRVAFSHIGHPLVGDTLYG