ggKbase home page

NECEvent2014_2_8_scaffold_3688_1

Organism: NECEvent2014_2_8_Veillonella_parvula-rel_39_106

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 8
Location: comp(286..1104)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 261.0
  • Bit_score: 533
  • Evalue 1.60e-148
UPI0003D66318 related cluster n=1 Tax=unknown RepID=UPI0003D66318 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 261.0
  • Bit_score: 533
  • Evalue 1.10e-148
  • rbh
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 93.1
  • Coverage: 260.0
  • Bit_score: 502
  • Evalue 1.00e-139

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Veillonella sp. DORA_A_3_16_22 → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 819
CCTTGTACTCATTGCATTGTGGTGGTTAGATCTATGAGAAATATACGAATCATAGTTGCTTATGATGGCACCGATTTGGCAGGCTATCAGAAGCAACCTGATGATAAGGGCTTAACCGTACAAGGTTGCTTAGAATATGGATTATCTAAAATTTGTAATGAACCCATACAAATCTATGGAGCTTCTAGAACAGATGCAGGTGTACATGCGAAGTTTCAAGTATGTACGTTCCAAACATCTGGATCTATACCAGCAGAAAACATTCCTCGTGCTATGATTGCGCATATCCCAAAGGATATCGTTGTTCTTGAAGCCCTGGAAATTCCACTCGATTGGAAGCCTCGATGGAATATATATGGTAAAGAATATGTATATACCATTCATAATCAGCTCATTGCCAATCCTTTGACAAAACGATACCATTGGCATGTTAAGAAGCCTCTTAATATCGACCTCATGCAAGCTGCAGGCAATGAATTATTAGGCACCCATGACTTTACTACCTTAAAAGGGACGAATTCAACACCTGCTGATCCGGTAAAAACAATTATAGGAATTCATGTAGAGGCAGAAGGCTCTCATGTTACCATTTCTGTAGTGGGGGATGGGTTCTTATACCACATGGTTCGCAATATTGCAGGGCTCCTCGTCGATGTAGGCCTTGGAAGACGCAAGGTGGAGGATATCAAGGGCTATTTGGCCGCTAAAGATCGTCGTGTTATAGGTAAAACGGCGCCAGCCCAAGGGTTATGTTTAGAGGAGATATTCTTTACGAAAGAACGTCAGCAAGAGGTGTTACAGAATAAATATTCTATATAA
PROTEIN sequence
Length: 273
PCTHCIVVVRSMRNIRIIVAYDGTDLAGYQKQPDDKGLTVQGCLEYGLSKICNEPIQIYGASRTDAGVHAKFQVCTFQTSGSIPAENIPRAMIAHIPKDIVVLEALEIPLDWKPRWNIYGKEYVYTIHNQLIANPLTKRYHWHVKKPLNIDLMQAAGNELLGTHDFTTLKGTNSTPADPVKTIIGIHVEAEGSHVTISVVGDGFLYHMVRNIAGLLVDVGLGRRKVEDIKGYLAAKDRRVIGKTAPAQGLCLEEIFFTKERQQEVLQNKYSI*