ggKbase home page

NECEvent2014_2_8_scaffold_942_1

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: comp(98..1297)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system (T2SS), F family protein n=164 Tax=Clostridium difficile RepID=C9XSB5_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 394.0
  • Bit_score: 751
  • Evalue 3.90e-214
  • rbh
type IV pilus assembly protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 394.0
  • Bit_score: 751
  • Evalue 1.10e-214
Type II secretion system (T2SS), F family protein {ECO:0000313|EMBL:EQE58885.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 394.0
  • Bit_score: 751
  • Evalue 5.50e-214

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1200
ATGAAAAGTTTTAAATACACAGTAATAAAAGAGGACGGAAAAAAGCAAACTGATGTGATTGAAGCCAACGATTTTAATGAAGCTAGAAATCTTCTTAGAAAGAGAAATCTTAGAGTTATTGAAATCAAAGAAAGCAAAAATAAAAATATAAGATTATCTAGTAGAAAGAGAAAAAAAGACTTAGGAGCTGACCAGATAAGCCACTTTTGTAGACAGTTTGCTATTATAGTATCTTCTGGTATAAATAGTATTTCTGGATTAGAAACATTAGCTAGAAGGTCAACTAACATTACATTAAGAGAAGAAATTAATCGTATAGTGGCAGAAATAAAAGTAGGTTCTACTATTGCAGATTCAATGCTTTCATCAAAATCAAAGTTTCCAAAGTTACTCGGTGCTATGGTAGCTACAGGTGAAGCTACAGGTAAATTAGATGAAGTATTAAAAAGTATGGCTTCATTTTATGCAAGTGAACACAGGGTTAAACAAAAGCTTAGAAATGCTGCAACATATCCATTAATAGTTTTGATTTCTTCATTTATAATGATTTTTATATTTACAACATTTATGGTGCCTAAGATGATTAATTCAATTACAACAGTAGGAGCAACTCTTCCACTTATAACAAGAATTGTTATGGGGTTTGGTATGTTTATGAAGAAGTTTTGGATAATAGTACTTTTAGTTATTATATTATTTATCTATCAGTTTAAAAAATATTTAAAAACGTCAGTTGGAAGGGCTCATAAAGATAGAGTTATAAACAAGATACCTGTTTTAGGAAAAGGAATAAATTGTATGGTAGCTACACGATTTTCAAGAGCATTGTATCTATTTGTATCAACAGGATACCCATTAGTTCAAGGGCTTGATTATATTATAGATAGTGTAAATAACACTATGGCAGAGAAGATTTTAGCATCAGCTAAAGATGGAATAACAAGAGGAGAAGGCTTAGCAGAAAATTTAGAGAGATATACGTATTTTGACTCTGTGTTGGTACAGATGATAGCTATAGGGGAGCAGACAGGGGAATTAGAGAATATAAGTAGACAGATGGCAGAATTTTATGAGTATGAATCCGAGATTTATTTAAATAGGATGGCCTCAATGATAGAGCCTGTTTTAATAATTGCAGTTGGTATTATAGTTGCGATACTGGTTGTATCAATATTTATGCCAGGTGACCAACGTTCTTGA
PROTEIN sequence
Length: 400
MKSFKYTVIKEDGKKQTDVIEANDFNEARNLLRKRNLRVIEIKESKNKNIRLSSRKRKKDLGADQISHFCRQFAIIVSSGINSISGLETLARRSTNITLREEINRIVAEIKVGSTIADSMLSSKSKFPKLLGAMVATGEATGKLDEVLKSMASFYASEHRVKQKLRNAATYPLIVLISSFIMIFIFTTFMVPKMINSITTVGATLPLITRIVMGFGMFMKKFWIIVLLVIILFIYQFKKYLKTSVGRAHKDRVINKIPVLGKGINCMVATRFSRALYLFVSTGYPLVQGLDYIIDSVNNTMAEKILASAKDGITRGEGLAENLERYTYFDSVLVQMIAIGEQTGELENISRQMAEFYEYESEIYLNRMASMIEPVLIIAVGIIVAILVVSIFMPGDQRS*