ggKbase home page

NECEvent2014_2_8_scaffold_678_1

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: comp(2..418)

Top 3 Functional Annotations

Value Algorithm Source
PTS system sorbose-specific iic component family protein n=1 Tax=Clostridium difficile CD170 RepID=T3EYY3_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 139.0
  • Bit_score: 277
  • Evalue 5.70e-72
PTS system transporter subunit IIC similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 139.0
  • Bit_score: 277
  • Evalue 1.60e-72
PTS system, xyloside-specific IIC component {ECO:0000313|EMBL:CCK99545.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pe similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 139.0
  • Bit_score: 277
  • Evalue 8.10e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 417
ATGGAGCCACAATTATGGCAATTATTATTAATCGTACTATATGGATTTTTTATAAACTATGAAAAAAATTCAACAATGTTTGGAACATATCAACCAGTAACAGCAGGTTTTATTACTGGTCTTATCTTAGGAGATATAAATACAGGGTTATATATTGGAGGTACATTACAGCTATTATCATTAGGTATTAGTAACTTTGGTGGAGCATCAATACCTGATTATCAAACAGCAAGTATAGTAGCCACATTTATAACTATTACGACTAAGCAAGAAGCATCTGTAGGAATCTCTATAGGTATTCCAGTTGCTTTATTGATGGTACAATTAGATGTTCTTAGAAATACTATTGGTATATGGCTAGTTCATAAAGCAGAAGATGGAGCTAAAAAAGGAAATTATAAAAATATAACCTATATG
PROTEIN sequence
Length: 139
MEPQLWQLLLIVLYGFFINYEKNSTMFGTYQPVTAGFITGLILGDINTGLYIGGTLQLLSLGISNFGGASIPDYQTASIVATFITITTKQEASVGISIGIPVALLMVQLDVLRNTIGIWLVHKAEDGAKKGNYKNITYM