ggKbase home page

NECEvent2014_2_8_scaffold_1125_3

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: 1769..2488

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transport system, multidrug-family permease n=46 Tax=Clostridium difficile RepID=Q186M5_CLOD6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 240.0
  • Bit_score: 467
  • Evalue 6.70e-129
  • rbh
ABC-type transport system, multidrug-familypermease similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 240.0
  • Bit_score: 467
  • Evalue 1.90e-129
ABC transporter permease {ECO:0000313|EMBL:CKH09815.1}; ABC-type transport system, multidrug-familypermease {ECO:0000313|EMBL:CEJ98266.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostri similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 240.0
  • Bit_score: 467
  • Evalue 9.50e-129

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 720
ATGATGTATTTAGTTAAAGCTGAAATGATAAAAATATTAAAATCAAAGAGTGTTTGGATAATTTGGCTGTTTTTAATATTTTTTGGATTTTTTCTGATTAGAAAGTTTGATGTTTTAGATACTTATGCAGATATATTTTACAAGATAGAAGGCTCAATACCTCTAATAGGTTTGATAATGTTTATAATAACTTCTGGAAATTACATTAAAGAATATGATTCTAATATGACAGGTTTAATAAATACAACTAAAAAGGGAAAAAAATCAGTAGTATTATCAAAACTAGTAGCTAATGGATTAATTTTATCTATTATTAATATTTCTTTTATATTGTTAGTAGGAATTAGAGGTTTTAGTTTTTTTGATTTTAAAAATTTAAATGAACCGATTCATAACTTATGGTACTTTGGAAATAGTAATTTAAATCTTACAGTAATACAAATGTATATAATTGTTATATTGACTACTATTTTTGCTTCTTTTATATTTGCACAAATAGGCTTAACACTTTCATCTATATTTAAATCGGCTGTAATTCCATTTATACTAGGTGGATTGATAATGGCAATTCCATACTTTAGTGTAGGTTTTATACCAGATAAAGCTATAAAATTTATGTCAGTGACTCCAAATTGGATTATGATGAGCCAACAAATGGTTAAGTATAATGTACCAAGTATTTTGATAGTTTTTTCTATAGTAATCTCAATTATATTAATG
PROTEIN sequence
Length: 240
MMYLVKAEMIKILKSKSVWIIWLFLIFFGFFLIRKFDVLDTYADIFYKIEGSIPLIGLIMFIITSGNYIKEYDSNMTGLINTTKKGKKSVVLSKLVANGLILSIINISFILLVGIRGFSFFDFKNLNEPIHNLWYFGNSNLNLTVIQMYIIVILTTIFASFIFAQIGLTLSSIFKSAVIPFILGGLIMAIPYFSVGFIPDKAIKFMSVTPNWIMMSQQMVKYNVPSILIVFSIVISIILM