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NECEvent2014_2_8_scaffold_2742_1

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: 1..630

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000 similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 209.0
  • Bit_score: 412
  • Evalue 4.10e-112
Shikimate / quinate 5-dehydrogenase family protein n=20 Tax=Clostridium difficile RepID=T2TJA3_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 209.0
  • Bit_score: 412
  • Evalue 2.90e-112
  • rbh
shikimate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 209.0
  • Bit_score: 412
  • Evalue 8.30e-113

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 630
ACTGTACCATATAAGGAGCGTATTATGAAATATCTTGATTTTATATCACCAGAGGCAAAACGTATAGGAGCAGTTAATACAATTTTACTCAGAGAAAATATGTTATATGGTTACAATACAGATTACTTTGGTCTTGATAGTATGTTTAAAATGGCTAATATTGATGTTCAAGGAAAAGTAGCAGTTATATTAGGAACTGGAGGTGCTTCTAAAGCTGCTCTTACATATTTTATTGATTCTGGTATAGAAAAGCTTTATGTTTCAACTAGAAAAAAGGATGATAAAAAATTATTAAATAGTAAAGCTATATTAATAGATTATGAAGAACTTAAACATATAAAAGGAGATATAATATTAAATGCTACACCAGTAGGTATGTACCCTAATGTAGGAATTTCACCAGTGTCAAAATCTATTATACAAAATTTTGATATATTAATAGATTTAATTTACAATCCTGGAGAAACAGAGTTTTTAAGAATTGGTAATAGTATGGGTAAAAAAACTTGTGATGGATTATATATGCTGGTGGGGCTAGCAATAAAATCTCAGGAAATTTGGCAAGATACTAAAATAGATAATAGTATTTTAGATGTTATATATAATGAACTAAAATTAGAATTTTTGTAA
PROTEIN sequence
Length: 210
TVPYKERIMKYLDFISPEAKRIGAVNTILLRENMLYGYNTDYFGLDSMFKMANIDVQGKVAVILGTGGASKAALTYFIDSGIEKLYVSTRKKDDKKLLNSKAILIDYEELKHIKGDIILNATPVGMYPNVGISPVSKSIIQNFDILIDLIYNPGETEFLRIGNSMGKKTCDGLYMLVGLAIKSQEIWQDTKIDNSILDVIYNELKLEFL*