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NECEvent2014_2_8_scaffold_1712_2

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: comp(1130..1843)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain, rpiR family protein n=56 Tax=Clostridium difficile RepID=T3G758_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 237.0
  • Bit_score: 470
  • Evalue 1.30e-129
  • rbh
phosphosugar-binding transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 237.0
  • Bit_score: 470
  • Evalue 3.80e-130
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:CCK99537.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 237.0
  • Bit_score: 470
  • Evalue 1.90e-129

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 714
ATAACTGCAAATAAAAAACATTGTAGTAAGATGTCAATAAATGAACTTGCTATGAAATGTAATGTGTCTCGTGCAACTATTACAAGATTTGTTAAAAAATTAGATTTAAAAGGTTTCAGTGAGTTTAAAGTATTATTAAGCTGGGAATCAGAAAAGGTTCATGTCATAGAAAATCAGTCATTTGATATTGCATGTAATTCAATAATTAAGTATGTTGAAGATCAAAAAAATAAAGATTATGATGCATTGTGTAAACTTCTTTATGAATCAAGAACAATATACGCTTATGGTTCAGGTGATATTCAAAATGTGGTTGCAAAACAGATAAAGAGAATGTTCTTATCATGTCAAGAAATAATATATGATTTTGAGGGAAGAACATTTGATGATTCTTTTTACAATATTGTCAGTAAAAATGATGTTATGATTATTATATCTCTAAGTGGTGAGAATGAGAATACACTTAATATTGCTAGAAGATTAAAATTAATAGGAACTAAAATAATTTCAATTACAGAGTTTAAAAATAATACATTGACTGATTTAAGTGATGAATCAATTTATATTTCAGCGACTAATATCTCATTTTTACAAATGCACCCTAGTTATAAATTGACAATGTTATATTTTATATTGATTGAGTTATTATTTATTAAATATAGTATTTATAAAAGGCATAGAATGATTACAGAAGGGATTGATTGCAAATTGTAG
PROTEIN sequence
Length: 238
ITANKKHCSKMSINELAMKCNVSRATITRFVKKLDLKGFSEFKVLLSWESEKVHVIENQSFDIACNSIIKYVEDQKNKDYDALCKLLYESRTIYAYGSGDIQNVVAKQIKRMFLSCQEIIYDFEGRTFDDSFYNIVSKNDVMIIISLSGENENTLNIARRLKLIGTKIISITEFKNNTLTDLSDESIYISATNISFLQMHPSYKLTMLYFILIELLFIKYSIYKRHRMITEGIDCKL*