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NECEvent2014_2_8_scaffold_3623_1

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: comp(3..773)

Top 3 Functional Annotations

Value Algorithm Source
Exonuclease SbcCD, D subunit n=1 Tax=Clostridium difficile CD22 RepID=T2VRN1_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 257.0
  • Bit_score: 517
  • Evalue 1.00e-143
  • rbh
sbcD; Nuclease SbcCD subunit D similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 257.0
  • Bit_score: 517
  • Evalue 2.90e-144
DNA repair exonuclease {ECO:0000313|EMBL:CDS85574.1}; Nuclease SbcCD subunit D {ECO:0000313|EMBL:CDS86118.1}; Nuclease subunit D {ECO:0000313|EMBL:CKG91978.1}; TaxID=1496 species="Bacteria; Firmicutes similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 257.0
  • Bit_score: 517
  • Evalue 1.50e-143

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 771
ATGAGATTTATTCATACATCAGATTGGCATCTAGGGAAGTCCCTAGAAGGCCATTCTAGAATTGAGGAACAAGCAAAGTTTTGTGAGGAATTTATAAAAATAGTAGAATCAAATGAAATAGATATGGTTATAATTGCTGGAGATGTATATGATACTTCTAATCCCCCAGCACAAGCAGAAAAACTATTTTATCAGACTGTATCAAGACTTGCCAATAATGGTCAGAGGTGTGTATTAATAATTTCAGGAAATCATGATAATCCAGAGAGACTCTCTGCAATAACACCTCTAGCACATGAACAGGGGATACTTATATATGGTTATCCATTAAGTGCTACGATAGAAGCTAAGTATAAAGGGTTTGAAATAACATATGCAACTCAGGGATGTACAAAACTGAATATAAATGGAGAAAATATTGTGGTTGCTACATTACCTTATCCAAGTGAAAAAAGATTAAATGAAGTTTTTTCAAGTGAAGATGAGTTTGAGAAACAAAAAAATTATTCTGAAAAGGTAGGAGATATATTTAGAAGTTTAGAAGAAAATTTTAGAAGTGATACTATAAATATAGCCGTATCACATATATTTGTAATAGGTGGAGAGAGTACTGAATCAGAAAGACCTATACAATTAGGTGGAAGTTTTTTAGTTGAAAGAAAAGATTTGCCAGAAAAGGCTCAATATACTGCACTAGGTCATTTACATAAACAACAAAAAGCTTCCGAACGTTTAAATGCATACTATTCTGGTTCTCCACTTCAATATAGC
PROTEIN sequence
Length: 257
MRFIHTSDWHLGKSLEGHSRIEEQAKFCEEFIKIVESNEIDMVIIAGDVYDTSNPPAQAEKLFYQTVSRLANNGQRCVLIISGNHDNPERLSAITPLAHEQGILIYGYPLSATIEAKYKGFEITYATQGCTKLNINGENIVVATLPYPSEKRLNEVFSSEDEFEKQKNYSEKVGDIFRSLEENFRSDTINIAVSHIFVIGGESTESERPIQLGGSFLVERKDLPEKAQYTALGHLHKQQKASERLNAYYSGSPLQYS