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NECEvent2014_3_3_UNK

In projects: NECEvent2014_3_3
Displaying items 1-50 of 363 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_3_3_scaffold_3365 173_001_scaffold_3365
Species: Clostridium tetanomorphum (50%)
2 1597 bp 27.99 7.70 100.88
NECEvent2014_3_3_scaffold_2833 173_001_scaffold_2833
Species: Clostridium botulinum (50%)
2 1892 bp 25.11 5.39 100.85
NECEvent2014_3_3_scaffold_4253 173_001_scaffold_4253
Species: Enterobacter aerogenes (50%)
2 1229 bp 60.29 4.64 100.57
NECEvent2014_3_3_scaffold_1960 173_001_scaffold_1960
Species: Clostridium sp. HMP27 (50%)
4 2706 bp 32.93 8.87 100.55
NECEvent2014_3_3_scaffold_1329 173_001_scaffold_1329
Species: Alkaliphilus metalliredigens (50%)
8 3994 bp 31.75 10.07 100.50
NECEvent2014_3_3_scaffold_4222 173_001_scaffold_4222
Species: Enterobacter aerogenes (100%)
2 1239 bp 56.82 3.87 100.48
NECEvent2014_3_3_scaffold_3394 173_001_scaffold_3394
Species: Enterobacter aerogenes (66.67%)
3 1580 bp 55.00 4.37 100.44
NECEvent2014_3_3_scaffold_1250 173_001_scaffold_1250
Species: Streptococcus gallolyticus (100%)
4 4263 bp 27.87 7.00 100.42
NECEvent2014_3_3_scaffold_1923 173_001_scaffold_1923
Species: Dialister succinatiphilus (50%)
2 2761 bp 26.22 7.50 100.40
NECEvent2014_3_3_scaffold_3806 173_001_scaffold_3806
Species: Escherichia coli (50%)
2 1393 bp 51.62 4.31 100.14
NECEvent2014_3_3_scaffold_2722 173_001_scaffold_2722
Species: Brevibacillus sp. CF112 (66.67%)
3 1976 bp 34.11 7.74 100.05
NECEvent2014_3_3_scaffold_4134 173_001_scaffold_4134
Species: Klebsiella pneumoniae (100%)
1 1272 bp 51.65 5.90 100.00
NECEvent2014_3_3_scaffold_3825 173_001_scaffold_3825
Species: Alkaliphilus oremlandii (100%)
1 1383 bp 33.41 7.81 100.00
NECEvent2014_3_3_scaffold_3111 173_001_scaffold_3111
Species: Streptococcus anginosus (100%)
1 1722 bp 31.88 7.14 100.00
NECEvent2014_3_3_scaffold_3371 173_001_scaffold_3371
Species: Treponema lecithinolyticum (100%)
1 1594 bp 34.69 9.13 99.94
NECEvent2014_3_3_scaffold_3981 173_001_scaffold_3981
Species: BJP_IG2069_Anaerolineales_43_63 (100%)
1 1324 bp 31.42 8.72 99.92
NECEvent2014_3_3_scaffold_4018 173_001_scaffold_4018
Species: BJP_IG2069_Anaerolineales_43_63 (100%)
1 1309 bp 31.09 8.25 99.92
NECEvent2014_3_3_scaffold_4137 173_001_scaffold_4137
Species: Tepidanaerobacter acetatoxydans (100%)
1 1270 bp 31.10 9.21 99.92
NECEvent2014_3_3_scaffold_4614 173_001_scaffold_4614
Species: Klebsiella oxytoca (100%)
1 1120 bp 66.61 143.44 99.91
NECEvent2014_3_3_scaffold_4873 173_001_scaffold_4873
Species: Vibrio sp. 04Ya090 (100%)
1 1045 bp 45.07 383.11 99.90
NECEvent2014_3_3_scaffold_2968 173_001_scaffold_2968
Species: Citrobacter koseri (100%)
1 1811 bp 55.49 4.97 99.89
NECEvent2014_3_3_scaffold_3631 173_001_scaffold_3631
Species: Haloplasma contractile (100%)
1 1466 bp 28.04 6.14 99.86
NECEvent2014_3_3_scaffold_3761 173_001_scaffold_3761 1 1412 bp 29.39 8.50 99.86
NECEvent2014_3_3_scaffold_3872 173_001_scaffold_3872
Species: Methanolobus psychrophilus (100%)
1 1361 bp 26.82 7.94 99.85
NECEvent2014_3_3_scaffold_4028 173_001_scaffold_4028
Species: Treponema vincentii (100%)
1 1307 bp 35.50 19.40 99.85
NECEvent2014_3_3_scaffold_4097 173_001_scaffold_4097
Species: Geomicrobium sp. JCM 19038 (100%)
1 1286 bp 35.23 12.36 99.84
NECEvent2014_3_3_scaffold_4184 173_001_scaffold_4184
Species: Alkaliphilus oremlandii (100%)
1 1250 bp 29.84 6.96 99.84
NECEvent2014_3_3_scaffold_2934 173_001_scaffold_2934
Species: Klebsiella pneumoniae (100%)
1 1830 bp 60.16 4.10 99.84
NECEvent2014_3_3_scaffold_4462 173_001_scaffold_4462
Species: Escherichia coli (100%)
1 1169 bp 50.81 5.39 99.83
NECEvent2014_3_3_scaffold_4551 173_001_scaffold_4551
Species: Haloplasma contractile (100%)
1 1136 bp 28.43 8.58 99.82
NECEvent2014_3_3_scaffold_4670 173_001_scaffold_4670
Species: Clostridium sp. NCR (100%)
1 1103 bp 27.56 6.26 99.82
NECEvent2014_3_3_scaffold_4753 173_001_scaffold_4753
Species: Enterobacter aerogenes (100%)
1 1076 bp 55.48 17.01 99.81
NECEvent2014_3_3_scaffold_3326 173_001_scaffold_3326
Species: Enterobacter aerogenes (100%)
1 1614 bp 53.41 4.93 99.81
NECEvent2014_3_3_scaffold_4828 173_001_scaffold_4828
Species: termite gut metagenome (100%)
1 1055 bp 57.44 4.55 99.81
NECEvent2014_3_3_scaffold_3913 173_001_scaffold_3913
Species: Escherichia coli (100%)
1 1347 bp 55.01 3.34 99.78
NECEvent2014_3_3_scaffold_3985 173_001_scaffold_3985
Species: Halanaerobium hydrogeniformans (100%)
1 1323 bp 36.43 10.20 99.77
NECEvent2014_3_3_scaffold_4852 173_001_scaffold_4852
Species: GWB2_Clostridiales_37_7_curated (100%)
1 1050 bp 28.10 7.43 99.71
NECEvent2014_3_3_scaffold_3828 173_001_scaffold_3828
Species: Clostridium sp. IBUN22A (100%)
1 1381 bp 23.75 5.97 99.71
NECEvent2014_3_3_scaffold_4944 173_001_scaffold_4944
Species: Enterobacter aerogenes (100%)
1 1026 bp 59.16 4.09 99.71
NECEvent2014_3_3_scaffold_4945 173_001_scaffold_4945
Species: Escherichia coli (100%)
1 1026 bp 55.85 6.43 99.71
NECEvent2014_3_3_scaffold_492 173_001_scaffold_492
Species: Bacillus mycoides (100%)
2 10180 bp 37.64 61.24 99.70
NECEvent2014_3_3_scaffold_4065 173_001_scaffold_4065
Species: Escherichia coli (100%)
1 1297 bp 57.52 3.93 99.69
NECEvent2014_3_3_scaffold_4374 173_001_scaffold_4374
Species: Escherichia coli (100%)
1 1195 bp 61.17 4.52 99.67
NECEvent2014_3_3_scaffold_4397 173_001_scaffold_4397
Species: Clostridium botulinum (100%)
2 1189 bp 30.78 4.04 99.66
NECEvent2014_3_3_scaffold_4691 173_001_scaffold_4691
Species: Caloramator australicus (100%)
1 1096 bp 36.13 6.57 99.63
NECEvent2014_3_3_scaffold_1717 173_001_scaffold_1717 5 3123 bp 27.92 7.88 99.62
NECEvent2014_3_3_scaffold_3466 173_001_scaffold_3466
Species: Clostridium ultunense (50%)
2 1542 bp 25.10 5.64 99.61
NECEvent2014_3_3_scaffold_2901 173_001_scaffold_2901
Species: Eubacterium acidaminophilum (50%)
2 1846 bp 30.77 7.88 99.46
NECEvent2014_3_3_scaffold_2186 173_001_scaffold_2186
Species: Peptoniphilus sp. oral taxon 386 (50%)
2 2441 bp 35.89 10.57 99.43
NECEvent2014_3_3_scaffold_2059 173_001_scaffold_2059
Species: Peptoniphilus sp. BV3C26 (66.67%)
3 2568 bp 32.98 7.71 99.30
Displaying items 1-50 of 363 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.