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NECEvent2014_3_3_UNK

In projects: NECEvent2014_3_3
Displaying items 251-300 of 363 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_3_3_scaffold_1135 173_001_scaffold_1135
Species: Alkaliphilus oremlandii (100%)
4 4628 bp 33.75 10.63 95.35
NECEvent2014_3_3_scaffold_3322 173_001_scaffold_3322
Species: Escherichia coli (50%)
2 1615 bp 51.83 95.67 95.67
NECEvent2014_3_3_scaffold_5057 173_001_scaffold_5057
Species: Paenibacillus durus (100%)
1 1000 bp 30.90 8.70 95.70
NECEvent2014_3_3_scaffold_571 173_001_scaffold_571
Phylum: Firmicutes (77.78%)
9 8994 bp 31.72 8.82 95.73
NECEvent2014_3_3_scaffold_1175 173_001_scaffold_1175
Domain: Bacteria (80%)
5 4471 bp 27.35 7.11 95.88
NECEvent2014_3_3_scaffold_1756 173_001_scaffold_1756
Order: Clostridiales (75%)
4 3038 bp 34.23 8.29 95.98
NECEvent2014_3_3_scaffold_1367 173_001_scaffold_1367
Species: Peptoniphilus lacrimalis (50%)
2 3913 bp 27.68 6.98 96.06
NECEvent2014_3_3_scaffold_4421 173_001_scaffold_4421
Species: Methanoplanus limicola (50%)
2 1183 bp 28.74 7.61 96.11
NECEvent2014_3_3_scaffold_1719 173_001_scaffold_1719
Species: Johnsonella ignava (66.67%)
6 3121 bp 34.35 6.58 96.12
NECEvent2014_3_3_scaffold_1005 173_001_scaffold_1005
Species: Streptococcus anginosus (100%)
7 5259 bp 45.10 6.62 96.29
NECEvent2014_3_3_scaffold_1748 173_001_scaffold_1748
Species: Dorea formicigenerans (66.67%)
3 3059 bp 33.25 9.02 96.31
NECEvent2014_3_3_scaffold_1541 173_001_scaffold_1541
Species: Paenibacillus riograndensis (75%)
4 3468 bp 26.70 8.87 96.37
NECEvent2014_3_3_scaffold_4268 173_001_scaffold_4268
Species: [Clostridium] papyrosolvens (50%)
2 1225 bp 35.59 30.98 96.49
NECEvent2014_3_3_scaffold_2704 173_001_scaffold_2704
Species: Klebsiella oxytoca (50%)
2 1996 bp 51.15 98.00 96.49
NECEvent2014_3_3_scaffold_3889 173_001_scaffold_3889
Species: Enterobacter aerogenes (50%)
2 1355 bp 48.04 5.09 96.53
NECEvent2014_3_3_scaffold_3660 173_001_scaffold_3660
Species: Enterobacter aerogenes (100%)
1 1454 bp 57.02 4.54 96.56
NECEvent2014_3_3_scaffold_2114 173_001_scaffold_2114
Species: Firmicutes bacterium CAG:137 (66.67%)
3 2501 bp 31.79 8.52 96.68
NECEvent2014_3_3_scaffold_1254 173_001_scaffold_1254
Species: Streptococcus anginosus (100%)
3 4243 bp 44.47 7.32 96.72
NECEvent2014_3_3_scaffold_3361 173_001_scaffold_3361
Species: Caloranaerobacter azorensis (100%)
1 1597 bp 29.37 7.23 96.74
NECEvent2014_3_3_scaffold_3411 173_001_scaffold_3411
Species: Klebsiella pneumoniae (50%)
2 1572 bp 55.73 4.77 96.76
NECEvent2014_3_3_scaffold_4911 173_001_scaffold_4911
Species: Klebsiella pneumoniae (50%)
2 1035 bp 52.46 5.51 96.81
NECEvent2014_3_3_scaffold_4145 173_001_scaffold_4145
Species: Dorea sp. CAG:105 (100%)
1 1263 bp 34.05 10.69 96.91
NECEvent2014_3_3_scaffold_2085 173_001_scaffold_2085 5 2532 bp 57.39 4.21 97.04
NECEvent2014_3_3_scaffold_4284 173_001_scaffold_4284
Species: Clostridium ultunense (50%)
2 1221 bp 32.27 7.13 97.05
NECEvent2014_3_3_scaffold_2396 173_001_scaffold_2396
Genus: Ruminiclostridium (66.67%)
3 2237 bp 27.89 7.11 97.09
NECEvent2014_3_3_scaffold_2532 173_001_scaffold_2532
Species: Fervidicella metallireducens (50%)
2 2127 bp 30.65 6.77 97.18
NECEvent2014_3_3_scaffold_636 173_001_scaffold_636
Species: Alkaliphilus oremlandii (55.56%)
9 8229 bp 31.33 9.48 97.34
NECEvent2014_3_3_scaffold_469 173_001_scaffold_469
Species: Johnsonella ignava (100%)
3 10519 bp 36.73 7.16 97.37
NECEvent2014_3_3_scaffold_1556 173_001_scaffold_1556
Species: Alkaliphilus oremlandii (100%)
3 3444 bp 32.38 8.89 97.47
NECEvent2014_3_3_scaffold_3117 173_001_scaffold_3117
Species: Clostridium tetanomorphum (50%)
2 1720 bp 29.65 10.12 97.50
NECEvent2014_3_3_scaffold_2107 173_001_scaffold_2107
Species: Alkaliphilus oremlandii (50%)
2 2507 bp 33.47 12.80 97.53
NECEvent2014_3_3_scaffold_3932 173_001_scaffold_3932
Species: unidentified phage (100%)
1 1341 bp 33.26 10.51 97.54
NECEvent2014_3_3_scaffold_1963 173_001_scaffold_1963
Species: Eubacterium plexicaudatum (50%)
2 2701 bp 30.43 8.00 97.63
NECEvent2014_3_3_scaffold_1511 173_001_scaffold_1511
Phylum: Firmicutes (50%)
4 3547 bp 32.11 8.37 97.69
NECEvent2014_3_3_scaffold_2670 173_001_scaffold_2670
Species: Clostridium ultunense (50%)
2 2013 bp 28.46 8.64 97.76
NECEvent2014_3_3_scaffold_2999 173_001_scaffold_2999
Species: Alkaliphilus oremlandii (100%)
2 1792 bp 33.15 8.37 97.77
NECEvent2014_3_3_scaffold_2619 173_001_scaffold_2619
Species: Escherichia coli (100%)
2 2052 bp 54.68 6.29 97.81
NECEvent2014_3_3_scaffold_3291 173_001_scaffold_3291
Species: Bacillus sp. B-jedd (100%)
1 1630 bp 38.34 11.04 97.91
NECEvent2014_3_3_scaffold_3282 173_001_scaffold_3282
Species: Virgibacillus sp. Vm-5 (100%)
1 1633 bp 38.33 11.11 97.92
NECEvent2014_3_3_scaffold_4303 173_001_scaffold_4303
Species: Peptoniphilus sp. oral taxon 375 (100%)
1 1216 bp 37.17 19.49 97.94
NECEvent2014_3_3_scaffold_3769 173_001_scaffold_3769 3 1408 bp 30.54 11.72 98.01
NECEvent2014_3_3_scaffold_862 173_001_scaffold_862
Species: Alkaliphilus oremlandii (100%)
5 6218 bp 33.97 9.50 98.13
NECEvent2014_3_3_scaffold_2225 173_001_scaffold_2225
Species: Alkaliphilus metalliredigens (100%)
2 2398 bp 34.70 8.82 98.21
NECEvent2014_3_3_scaffold_2523 173_001_scaffold_2523
Order: Bacillales (66.67%)
3 2134 bp 33.22 9.91 98.27
NECEvent2014_3_3_scaffold_1965 173_001_scaffold_1965
Order: Enterobacteriales (100%)
3 2699 bp 54.17 4.56 98.37
NECEvent2014_3_3_scaffold_2203 173_001_scaffold_2203
Species: RBG_13_Chloroflexi_46_9_curated (50%)
4 2424 bp 31.35 6.81 98.39
NECEvent2014_3_3_scaffold_3212 173_001_scaffold_3212
Species: [Clostridium] papyrosolvens (100%)
2 1670 bp 27.84 7.01 98.44
NECEvent2014_3_3_scaffold_1870 173_001_scaffold_1870
Domain: Bacteria (66.67%)
3 2839 bp 24.62 6.55 98.49
NECEvent2014_3_3_scaffold_4295 173_001_scaffold_4295
Species: Enterobacter aerogenes (100%)
2 1218 bp 56.49 6.65 98.52
NECEvent2014_3_3_scaffold_2553 173_001_scaffold_2553
Species: Enterobacter aerogenes (100%)
3 2119 bp 59.04 5.88 98.54
Displaying items 251-300 of 363 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.