ggKbase home page

NECEvent2014_2_8_scaffold_3609_1

Organism: NECEvent2014_2_8_Staphylococcus_epidermidis_33_4_partial

partial RP 28 / 55 BSCG 22 / 51 ASCG 5 / 38
Location: 2..1114

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease J {ECO:0000256|PIRNR:PIRNR004803}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR004803};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus e similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 370.0
  • Bit_score: 734
  • Evalue 8.40e-209
Ribonuclease J 1 n=78 Tax=Staphylococcus RepID=RNJ1_STAEQ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 370.0
  • Bit_score: 734
  • Evalue 6.00e-209
  • rbh
Zn-dependent hydrolase, RNA-metabolising, CPSF 73 kDa analog similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 370.0
  • Bit_score: 734
  • Evalue 1.70e-209

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Staphylococcus epidermidis → Staphylococcus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1113
TGCTTACTATCAGACTCAACAAACGCACTAGTTCCAGATTTTACTTTAAGTGAACGTGAAGTTGGACAGAATGTCGATAAAATTTTCAGAAATTGTAAGGGGCGTATTATCTTTGCAACTTTTGCTTCTAATATTTATCGTGTTCAGCAAGCAGTTGAAGCAGCAATTAAATATAATCGTAAAATCGTTACATTTGGACGTTCAATGGAAAACAATATCAAAATTGGTATGGAACTAGGATATATCAAAGCGCCACCAGAAACGTTTATAGAACCTAATAAAATAAATAGTGTGCCTAAGCACGAGTTACTCATTCTTTGTACTGGTTCCCAAGGTGAACCTATGGCTGCATTATCAAGAATTGCAAATGGTACACATAAGCAAATAAAAATTATACCGGAAGACACTGTAGTATTTAGTTCTTCGCCTATTCCAGGTAACACTAAGAGTATCAATCGTACAATTAATGCGTTGTACAAAGCTGGTGCAGATGTGATTCATAGTAAAATTTCAAACATTCACACTTCTGGACACGGTTCTCAAGGTGATCAACAATTAATGTTACGTCTGATTCAACCTAAATACTTCCTGCCAATTCACGGTGAATATCGTATGCTTAAAGCTCATGGTGAGACTGGTGTTCAATGCGGTGTTGATGAAGATAATGTATTTATTTTCGATATCGGTGATGTACTTGCTTTAACACATGATTCTGCACGAAAAGCAGGAAGAATTCCTTCCGGCAATGTACTTGTTGATGGCAGTGGTATAGGTGATATTGGCAATGTTGTCATCAGAGATCGTAAATTACTTTCAGAAGAAGGGTTAGTTATTGTTGTTGTGAGCATTGACTTTAATACTAACAAATTACTATCTGGCCCTGATATTATTTCACGCGGTTTTGTTTATATGCGGGAATCTGGTCAATTAATTTATGATGCTCAACGTAAAATTAAAGGCGATGTCATTTCTAAACTTAACAGCAATAAAGATATTCAATGGCATCAAATTAAATCTTCAATTATCGAAACATTACATCCTTATCTTTATGAAAAAACAGCTCGAAAACCTATGATTTTACCTGTGATAATGAAAGTAAATGAAGATAAATAA
PROTEIN sequence
Length: 371
CLLSDSTNALVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNIYRVQQAVEAAIKYNRKIVTFGRSMENNIKIGMELGYIKAPPETFIEPNKINSVPKHELLILCTGSQGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINALYKAGADVIHSKISNIHTSGHGSQGDQQLMLRLIQPKYFLPIHGEYRMLKAHGETGVQCGVDEDNVFIFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSIDFNTNKLLSGPDIISRGFVYMRESGQLIYDAQRKIKGDVISKLNSNKDIQWHQIKSSIIETLHPYLYEKTARKPMILPVIMKVNEDK*