ggKbase home page

NECEvent2014_2_8_scaffold_186_11

Organism: NECEvent2014_2_8_Clostridium_plasmid_43_8

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 11383..11799

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70, region 4 family protein n=17 Tax=Clostridium difficile RepID=T2TTI4_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 138.0
  • Bit_score: 279
  • Evalue 2.00e-72
putative conjugative transposon proteinTn916-like, CTn7-Orf3 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 138.0
  • Bit_score: 279
  • Evalue 5.50e-73
DNA-directed RNA polymerase specialized sigma subunit {ECO:0000313|EMBL:CKG75598.1}; Putative conjugative transposon proteinTn916-like, CTn7-Orf3 {ECO:0000313|EMBL:CEK00031.1}; TaxID=1496 species="Bac similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 138.0
  • Bit_score: 279
  • Evalue 2.70e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 417
ATGAAACCATCTTCTTTCGAGGGCGCTATCAGACTTCAATTTGATTGTCTGGCTCGCAAGGTTGTAGGACGAACTGTAAAGAACTATGACCGAGAGCTTGGCAGACGTGCAAGACGTGAAACGCCGTTCTGTGATTTATCTGAAATGGAGTTAAACCAGATCGGTGTCATGGACGAGTATTGCGTTGAGTTTACGTCATTTGATGTATTTGGTTCAGAAGTCCATATCTATGATGAACGCTTATGTGAAGCTATCAAAGAATTAACAGAAAGCCGACGTAACATTCTGCTTATGTCCTACTTTCTTGAAATGACCGACGCTGAAATTGCAGAGGTTATGGAAATGGAACGATTTTCCGTATGTAGAAACAGGCTGCACACATTAAAGCTTATTAAGGATATGTACGAGGAGGAATAA
PROTEIN sequence
Length: 139
MKPSSFEGAIRLQFDCLARKVVGRTVKNYDRELGRRARRETPFCDLSEMELNQIGVMDEYCVEFTSFDVFGSEVHIYDERLCEAIKELTESRRNILLMSYFLEMTDAEIAEVMEMERFSVCRNRLHTLKLIKDMYEEE*