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NECEvent2014_2_5_scaffold_218_3

Organism: NECEvent2014_2_5_Peptoclostridium_difficile_31_7

near complete RP 45 / 55 BSCG 47 / 51 ASCG 13 / 38 MC: 2
Location: comp(3078..3548)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain, rpiR family protein n=2 Tax=Clostridium difficile RepID=T4RA42_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 156.0
  • Bit_score: 307
  • Evalue 1.00e-80
  • rbh
phosphosugar-binding transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 156.0
  • Bit_score: 307
  • Evalue 2.80e-81
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:CCK99537.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 156.0
  • Bit_score: 307
  • Evalue 1.40e-80

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 471
GCATTGTGTAAACTTCTTTATGAATCAAGAACAATATACGCTTATGGTTCAGGTGATATTCAAAATGTGGTTGCAAAACAGATAAAGAGAATGTTCTTATCATGTCAAGAAATAATATATGATTTTGAGGGAAGAACATTTGATGATTCTTTTTACAATATTGTCAGTAAAAATGATGTTATGATTATTATATCTCTAAGTGGTGAGAATGAGAATACACTTAATATTGCTAGAAGATTAAAATTAATAGGAACTAAAATAATTTCAATTACAGAGTTTAAAAATAATACATTGACTGATTTAAGTGATGAATCAATTTATATTTCAGCGACTAATATCTCATTTTTACAAATGCACCCTAGTTATAAATTGACAATGTTATATTTTATATTTATTGAGTTATTATTTATTAAATATAGTATTTATAAAAGGCATAGAATGATTACAGAAGGGATTGATTGCAAATTGTAG
PROTEIN sequence
Length: 157
ALCKLLYESRTIYAYGSGDIQNVVAKQIKRMFLSCQEIIYDFEGRTFDDSFYNIVSKNDVMIIISLSGENENTLNIARRLKLIGTKIISITEFKNNTLTDLSDESIYISATNISFLQMHPSYKLTMLYFIFIELLFIKYSIYKRHRMITEGIDCKL*