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NECEvent2014_3_4_UNK

In projects: NECEvent2014_3_4
Displaying items 51-70 of 70 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_3_4_scaffold_2400 173_002_scaffold_2400
Species: Klebsiella oxytoca (100%)
1 1331 bp 63.19 34.37 91.74
NECEvent2014_3_4_scaffold_2184 173_002_scaffold_2184
Species: Geomicrobium sp. JCM 19038 (50%)
2 2622 bp 36.00 39.65 99.08
NECEvent2014_3_4_scaffold_2768 173_002_scaffold_2768
Species: Lachnospiraceae bacterium 8_1_57FAA (100%)
1 1087 bp 31.37 40.29 92.46
NECEvent2014_3_4_scaffold_2248 173_002_scaffold_2248
Species: Ruminococcaceae bacterium D16 (100%)
1 1464 bp 32.38 42.42 100.00
NECEvent2014_3_4_scaffold_2391 173_002_scaffold_2391
Species: Clostridium saccharoperbutylacetonicum (100%)
2 1339 bp 31.29 52.32 87.83
NECEvent2014_3_4_scaffold_2513 173_002_scaffold_2513
Species: Klebsiella oxytoca (100%)
2 1247 bp 67.36 64.11 98.64
NECEvent2014_3_4_scaffold_709 173_002_scaffold_709
Domain: Bacteria (57.14%)
7 5767 bp 61.11 67.81 42.08
NECEvent2014_3_4_scaffold_776 173_002_scaffold_776
Domain: Bacteria (50%)
4 5123 bp 26.45 74.60 78.59
NECEvent2014_3_4_scaffold_623 173_002_scaffold_623
Species: Aneurinibacillus aneurinilyticus (50%)
2 7888 bp 52.98 78.23 99.57
NECEvent2014_3_4_scaffold_2701 173_002_scaffold_2701
Species: Klebsiella oxytoca (100%)
1 1120 bp 66.61 82.37 99.91
NECEvent2014_3_4_scaffold_1711 173_002_scaffold_1711
Species: Brevibacillus brevis (50%)
2 2071 bp 36.41 84.23 62.00
NECEvent2014_3_4_scaffold_2050 173_002_scaffold_2050
Species: Tepidanaerobacter acetatoxydans (100%)
1 1642 bp 33.98 87.79 71.80
NECEvent2014_3_4_scaffold_650 173_002_scaffold_650
Species: Escherichia coli (60%)
10 6683 bp 38.43 88.25 85.65
NECEvent2014_3_4_scaffold_2817 173_002_scaffold_2817 1 1055 bp 50.33 241.99 0.00
NECEvent2014_3_4_scaffold_1439 173_002_scaffold_1439
Species: human gut metagenome (100%)
2 2527 bp 48.24 269.07 16.62
NECEvent2014_3_4_scaffold_2395 173_002_scaffold_2395
Species: [Clostridium] clariflavum (100%)
1 1335 bp 31.31 341.24 77.30
NECEvent2014_3_4_scaffold_2833 173_002_scaffold_2833
Species: Vibrio sp. 04Ya090 (100%)
1 1045 bp 45.07 345.50 99.90
NECEvent2014_3_4_scaffold_2621 173_002_scaffold_2621 3 1180 bp 49.07 531.86 58.22
NECEvent2014_3_4_scaffold_1863 173_002_scaffold_1863
Species: Trichuris trichiura (50%)
2 1873 bp 54.99 588.31 33.48
NECEvent2014_3_4_scaffold_1658 173_002_scaffold_1658
Species: Paenibacillus sp. TCA20 (100%)
1 2770 bp 49.75 1388.18 5.85
Displaying items 51-70 of 70 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.