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NECEvent2014_4_7_scaffold_456_6

Organism: NECEvent2014_4_7_UNK

partial RP 1 / 55 BSCG 0 / 51 ASCG 3 / 38
Location: comp(6601..6873)

Top 3 Functional Annotations

Value Algorithm Source
Iso-IS1 ORF1 n=4 Tax=Shigella RepID=Q8VSD4_SHIFL similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 90.0
  • Bit_score: 169
  • Evalue 1.40e-39
iso-IS1 ORF1 similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 90.0
  • Bit_score: 168
  • Evalue 1.20e-39
Insertion element family protein {ECO:0000313|EMBL:EJL12538.1}; TaxID=754077 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 90.0
  • Bit_score: 168
  • Evalue 5.80e-39

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Taxonomy

Shigella sonnei → Shigella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
GTGGCTACCGTTACCGTCCATTGTCCCCGATGCCATTCAGATGAAATTTATCGCCATGGTCGCAGTACCTCACAACACGAGCGCTTTCGGTGCCGATCATGTAAACGTGTTTTCCAACTGACCTACACCTATGAAGCGCGGAAGCCGGGAGTCAAAGAACAAATCGTTGATATGGCTCATAACGGTTCCGGTGTTCGCGATACCGCCAGAACACTGAAGATCGGCATCAACACCGTCATACGGGCTTTAAAAAACTCTCACCCTGCCGCATAA
PROTEIN sequence
Length: 91
VATVTVHCPRCHSDEIYRHGRSTSQHERFRCRSCKRVFQLTYTYEARKPGVKEQIVDMAHNGSGVRDTARTLKIGINTVIRALKNSHPAA*