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NECEvent2014_2_7_scaffold_139_1

Organism: NECEvent2014_2_7_Veillonella_parvula-rel_39_10

near complete RP 48 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38 MC: 6
Location: comp(3..3581)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 999.99
  • Bit_score: 2333
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=4 Tax=Veillonella RepID=T0SUW0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 999.99
  • Bit_score: 2335
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 99.0
  • Coverage: 999.99
  • Bit_score: 2330
  • Evalue 0.0

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Taxonomy

Veillonella dispar → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3579
GTGCTAGACGTAAATGAATTCGATTCCATGCGAATCGGTTTAGCCTCTCCAGAGCAGATTTTATCCTGGTCTCATGGGGAAGTTAAGAAACCTGAAACAATTAACTACCGTACGTTGAAGCCAGAACGTGATGGTCTATTCTGTGAACGCATTTTTGGACCAACAAAGGACTGGGAATGTCACTGCGGCAAATATAAACGCATCCGCCATAAAGGCGTAGTCTGCGACAAATGTGGTGTAGAGGTTACTCGTGCGAAAGTACGTCGTGAACGTATGGGCCATATTCAATTGGCTACTCCTGTATCTCACATTTGGTACTTCAAAGGAATCCCATCCCGTATGGGGCTTATCCTTGACATATCACCACGTTCTTTGGAACGTGTATTATACTTTGCTTCCTACATCGTAGTAGATCCAGCTGGTACACCATTGACAAAACGTCAATTGTTGTCCGAGCAAGAATACCGCGAATACGAAGCTCAATTTAATGAAGACGGTTATACTATCGGTGGTAAATCCGTCGTAATCGAAACAGTGGCTCAACGTAATGAACGTTTAGCTATTGTTCGTGAAGCACAACGCAAAGAGCGCTATAATGCGGCTCTTCGTGATGATGCAACAATACCAGAAGCTGATAAGGAATACGAAGAATTAACTCGCGAAGAACGCTATGAGTTAGGCGCTGCTGAAGAGGTTCTCTTCGCATGTATCGACATGGGTGCTGAAGCGGTAAAAGCTCTCTTATCAGAACTTGATCTTGAAGCATTGAATGCCGAATTGCGCGAAGAGTTGAACACTGCTAGTGGTCAACGTAAAATCCGTGCAGTTCGTCGTTTGGAAGTAGTAGAAGCATTCCGTCAATCTGGGAACCGTCCAGAATGGATGATTATGGACATTGTTCCTGTAATCCCACCTGAATTGCGCCCTATGGTCCAATTAGATGGTGGCCGTTTTGCTACATCTGACCTCAACGATTTATACCGTCGTGTTATCAACCGTAACAACCGTTTGAAACGTTTACTCGACTTGGGTGCTCCTGATATCATCGTGCGCAACGAAAAACGCATGCTTCAAGAAGCGGTTGATGCATTGATTGATAATGGCCGTCGCGGTCGTCCTGTTACAGGTCCTGGTAACCGCCCATTGAAATCCTTGTCCGACATGCTTAAAGGTAAACAAGGTCGTTTCCGTCAAAACTTGCTCGGTAAACGTGTTGACTACTCCGGTCGTTCCGTAATCGTAGTAGGTCCTGAACTTAAAATGCACCAATGTGGTTTGCCAAAAGAAATGGCATTGGAATTGTTCAAACCGTTCGTTATGAAACGCTTGGTAGAACGTGGTCAAGCATCCAATATTAAGGCCGCTAAACGCCAAGTCGAAAGAATCGGCCCTGGCGTATGGGAATCCTTGGAAGAGGTAATTAAAGAACATCCAGTTCTCTTGAACCGTGCCCCTACATTGCATAGACTTGGTATTCAAGCCTTCGAACCAATCCTTTGGGAAGGCCGTGCTATCAAATTGCATCCATTAGTATGTACAGCCTTCAATGCCGACTTTGACGGTGACCAAATGGCGTGTCACTTACCATTGTCCGTAGAAGCACAAGCGGAAGCTCGTACATTGATGCTTTCTAGCCATAATATTTTGTCCACTAAGGATGGTAAGCCAGTAGCAGTACCTTCTCAAGATATGATCTTAGGTACATACTACCTAACAGTTGTACGCGAAGATACTCGTGATAAAGCAAAAACATTTGCTACCTATGATGAAGTTATGCTTGCCTATGAGTCTCATATCATTGGTTTGCAAGATATTCTTTATATCCGTTTACCTGATCATGGCCGTGTAGAAACAACAGCAGGACGCTTGATCTTCAACAATGCTTTATTCCCAGAATTGTGGCAATACGAGAAACGTGAAGATGGCACTTATTCTTTAGGTAAGGTTATGGATAAGAAAACAGTTGGTAAATTGGTTGATCAATGTTTCCAATTGTTTGGCAATGAAAAAACTGCAGAACTTTTGGACCGTATCAAGTCCTTGGGTTACTCCTTCGCACGTCGCGCAGGTATGACTGTAGCCATTGCTGATATTAAAGTACCAGAAGTTAAAACTAGTTTGTTAGATACAGCGGAACAAGAGGTAGAAAAAGTATCTCGTATGTACCGTCGTGGTCTTATTACAGAAGAAGAACGTTACCGTAAAACTATCCAATTATGGACAAAAGCAACGGAAGATGTTACTGATGCGATGATGGATAATATGGCGTGTGACAAAGATGGTTTCAACCCTGTTTACATGATGGCTATCTCTGGTGCCCGTGGTAATAAACAACAGATTCGTCAGCTTGCTGGTATGCGTGGTTTGATGGCCGATCCATCTGGTCGTATCATCGACTTGCCAATCAAAGCAAACTTTAAAGAAGGCTTGACTGTATTGGATTACTTTACATCCTCTCATGGTGCTCGTAAAGGTTTGGCCGATACAGCGCTTCGTACAGCTGACTCTGGTTACTTGACTCGTCGTCTTGTTGACGTATCTCAAGACGTTATCGTTCGCGAGGACGATTGTGACGTTGTAGGTATCGATCTTGTTCGTGAACGCGCTCGTTTGGCTACATCTCCACGTCAAGCATTGGAATTGTTAAAAGATAAACTTATTGGTCGTGTATTAGATAAAGATGTTGTGAATGTAGAAACAGGGGAACTTGTTGTACCTTCCGAAACTATCTTAGACGAACAATGTTTAGCTGATATTGCTGAATCCGGTGTAACATCTATCGCATTGCGCGGTGTACATTTAGGTTCTGACAGCGATATCAACCATACTAATTTGGTTCAAAAAATTATTCTTGGTGAAAGCGATGAACGCATCCGTGCAACATTAAAAGAAACTATGGTTCAAAATATGTTGAACAAGGATACTGTCCATGCCATCGTTGACAGCGAAGGTGTAGAAATCTTCCCTGCTGATACACGTCTCACTGAAGAAGGCATCGAAGCTATCCTTAACTCCGATGTAAAAGAAGTACAAGTACGCAACAACGAAATCCACGGTATCGAAGTGGAGGCAATCGTTGAGGGTACTGGCGTTATTGAACCATTAAAAGATCGTATCGTAGGTCGTATTGCAGCTGAAGAATTGGTTAATAAAGAAACTGGCGAAGTTATCGTTCCTCTTAACGGTGAAATCACAGAACCATTGGCTGATGAAGTTGTAAAACACTATGAAACAGTTAAAATCCGTTCCGTATTGACTTGCCGCAGCCCTTATGGCGTATGTCGCAAGTGCTATGGTCGCGACCTTGGTACAGGCGGTCAAGTCCAAGTTGGTGAAGCTGTAGGTATTATTGCAGCGCAATCCATCGGTGAACCTGGTACTCAGTTGACAATGCGTACATTCCATACAGGTGGTGTCGCAGGTGACGATATTACACAAGGTTTGCCACGTGTCGAAGAATTGTTCGAAGCGCGTAAACCAAAACGTAATGCTATCATCGCAGAAAATGAAGGTACAGTTCGCGTTGTACCTAATGAAGGTAAGAAAGGTACGAACACTATCTTTATCACTGGTGAAGAT
PROTEIN sequence
Length: 1193
VLDVNEFDSMRIGLASPEQILSWSHGEVKKPETINYRTLKPERDGLFCERIFGPTKDWECHCGKYKRIRHKGVVCDKCGVEVTRAKVRRERMGHIQLATPVSHIWYFKGIPSRMGLILDISPRSLERVLYFASYIVVDPAGTPLTKRQLLSEQEYREYEAQFNEDGYTIGGKSVVIETVAQRNERLAIVREAQRKERYNAALRDDATIPEADKEYEELTREERYELGAAEEVLFACIDMGAEAVKALLSELDLEALNAELREELNTASGQRKIRAVRRLEVVEAFRQSGNRPEWMIMDIVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVRNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMHQCGLPKEMALELFKPFVMKRLVERGQASNIKAAKRQVERIGPGVWESLEEVIKEHPVLLNRAPTLHRLGIQAFEPILWEGRAIKLHPLVCTAFNADFDGDQMACHLPLSVEAQAEARTLMLSSHNILSTKDGKPVAVPSQDMILGTYYLTVVREDTRDKAKTFATYDEVMLAYESHIIGLQDILYIRLPDHGRVETTAGRLIFNNALFPELWQYEKREDGTYSLGKVMDKKTVGKLVDQCFQLFGNEKTAELLDRIKSLGYSFARRAGMTVAIADIKVPEVKTSLLDTAEQEVEKVSRMYRRGLITEEERYRKTIQLWTKATEDVTDAMMDNMACDKDGFNPVYMMAISGARGNKQQIRQLAGMRGLMADPSGRIIDLPIKANFKEGLTVLDYFTSSHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREDDCDVVGIDLVRERARLATSPRQALELLKDKLIGRVLDKDVVNVETGELVVPSETILDEQCLADIAESGVTSIALRGVHLGSDSDINHTNLVQKIILGESDERIRATLKETMVQNMLNKDTVHAIVDSEGVEIFPADTRLTEEGIEAILNSDVKEVQVRNNEIHGIEVEAIVEGTGVIEPLKDRIVGRIAAEELVNKETGEVIVPLNGEITEPLADEVVKHYETVKIRSVLTCRSPYGVCRKCYGRDLGTGGQVQVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVEELFEARKPKRNAIIAENEGTVRVVPNEGKKGTNTIFITGED