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NECEvent2014_5_1_scaffold_1213_1

Organism: NECEvent2014_5_1_UNK

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 1..2094

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 701.0
  • Bit_score: 1054
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=2 Tax=Megasphaera RepID=D3LU43_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 701.0
  • Bit_score: 1054
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 698.0
  • Bit_score: 1048
  • Evalue 0.0

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Taxonomy

Megasphaera genomosp. type_1 → Megasphaera → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2094
AGCGAAGTACGTTACGTCACCGCCGATGCCGAGGAAAACCTCGTCGTGGCGCAGGCGAACGAGCCGCTCGATGAAAATAACCACTTTGAGCATGCGCATGTCGCAAGCCGTTTGCAGTCCGATGTTATTGAAGTCGCGCCGCAACGCGTGGATTTGATGGACGTCTCGCCGAAACAGGTCGTTTCGGTCGGTACGGCCTTGATCCCGTTCCTTGAAAACGACGATGCGAACCGCGCTTTGATGGGCGCGAACATGCAACGTCAGGCGGTACCGCTTTTGCGTACGCAGGCGCCGCTCGTCGGTACGGGCATGGAATACACCGCCGCCCGCGACTCCGGCGTGTGCGTTCTCGCGAAACGCGCGGGCACGGTGGAACGCGTCACCGGAAAAGAAATCATCGTCAAAACCGATGACGGTAAATTGGATCGTTACGATCTGATCAAATTCATGCGTTCCAACCAGAGCACCTGCATCAACCAGATCCCGCTCGTTTATAAGGGCGATCGGGTGGACGCGGGCGATGCGCTGGCGGACGGCATGGCGACCGACGGCGGCGAACTCGCGCTCGGTTACAACGTGCTGGTCGCGTTTATGCCGTGGGAAGGCTACAACTACGAAGACGCGATTCTTCTCTCGGAAGAATTGTGCAAGGAAGACATTTACACGTCGATCCATATTGAAGAATACGAATGCGATGCGCGCGACACGAAGCTCGGCGCGGAAGAAATTACCCGCCAGCTCCCGAATGTCAGCGAAGATTCGTTGAAATATTTGGATGAAGAAGGCATTATTTCGATCGGCGCGGAAGTGCGCCCGGGGGATGTCCTGGTCGGTAAAGTCACACCGAAAGGCGAAACCGAACAGACGCCGGAAGAACGTTTGCTGCGCGCCATTTTCGGCGACAAAGAACGCGAAGTCCGCGACACCAGCTTGCGCGTGCCGCACGGCGAATCCGGAAAGATCGTCGATGTTCGCGTGTTCACCCGTGAAAACGGCGATGAACTGCAGCCGGGCGTCAATAAACTCGTTCGCGTCTACATCGCGCAGAAACGTAAGATTCACGAAGGCGATAAGATGGCGGGCCGCCATGGTAACAAGGGCGTTGTCTCCCGCGTCATGCGCCAGGAAGATATGCCGTTCATGCCGGACGGCACGCCGATTCAGATCGTGTTGAACCCGCTCGGCGTACCGAGCCGTATGAACATCGGTCAGGTTTTAGAAACCCACTTGGGACGCGCGGCTCAGGCGTTGGGTATGGAAATTCGCAACAACGATCCGGATCTGCCGCGTCGCTTGAAAGAATACGGTTACGATGTCGATAAATACGGCATGCCCGAACCGGATGTCGCCGGTATTCATATCGCGACACCGGTCTTTGACGGCGCGTCGGAAGTCGACGTATTTAGCACGTTGAAACTCGCCAACTTGCCGGAAGACGGCAAGACCGAACTGTTCGACGGTCGCACCGGTGAAAAGATGGACAACCGCGTTACCGTTGGTTACAAATACATGTTGAAGTTGCACCACTTGGTCGATGACAAGATTCACGCCCGTTCGACCGGTCCGTACTCGCTCGTCACCCAACAACCGTTGGGCGGTAAAGCGCAGTTCGGCGGCCAGCGTTTCGGTGAAATGGAAGTCTGGGCGCTCGAAGCGTACGGCGCGGCGTACACCTTGCAAGAAATCTTGACGGTGAAATCCGATGACGTGATCGGCCGTGTGAAAGCGTACGAAAAAATCGTCAAAGGGGAAAATATCCCCGAACCGGGCGTTCCGGAATCGTTCAAGGTACTCTTGAAAGAGCTCCAGTCGATCGGCTTGGATGTTCGTATTTTGAATGAAAACGGCGAAGAAGTCGTCATCCGTGAACTCGAAGAAGAGGACTTGCCGCAGGCGGAAGAAAATGAACTGCGTGAAGTCATGGAAGCGGATGCCGGCGGGCAAAGTCGAGTTTCCGCGGAGACGGAAGACGCGGACAACGCGCCGGAAGAAAATGAAATGAGTGTGGAAGAAACGGCGCAGCAGGCCGATACCGCAAATATCGCCGCCGCGGAACCGTTCTTCACCGATACTGATAGTAACGACGCTGAATAG
PROTEIN sequence
Length: 698
SEVRYVTADAEENLVVAQANEPLDENNHFEHAHVASRLQSDVIEVAPQRVDLMDVSPKQVVSVGTALIPFLENDDANRALMGANMQRQAVPLLRTQAPLVGTGMEYTAARDSGVCVLAKRAGTVERVTGKEIIVKTDDGKLDRYDLIKFMRSNQSTCINQIPLVYKGDRVDAGDALADGMATDGGELALGYNVLVAFMPWEGYNYEDAILLSEELCKEDIYTSIHIEEYECDARDTKLGAEEITRQLPNVSEDSLKYLDEEGIISIGAEVRPGDVLVGKVTPKGETEQTPEERLLRAIFGDKEREVRDTSLRVPHGESGKIVDVRVFTRENGDELQPGVNKLVRVYIAQKRKIHEGDKMAGRHGNKGVVSRVMRQEDMPFMPDGTPIQIVLNPLGVPSRMNIGQVLETHLGRAAQALGMEIRNNDPDLPRRLKEYGYDVDKYGMPEPDVAGIHIATPVFDGASEVDVFSTLKLANLPEDGKTELFDGRTGEKMDNRVTVGYKYMLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTVKSDDVIGRVKAYEKIVKGENIPEPGVPESFKVLLKELQSIGLDVRILNENGEEVVIRELEEEDLPQAEENELREVMEADAGGQSRVSAETEDADNAPEENEMSVEETAQQADTANIAAAEPFFTDTDSNDAE*