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NECEvent2014_5_8_UNK

In projects: NECEvent2014_5_8

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 25.77 Longest contig: 21.46 Kbp Bin length: 515.60 Kbp GC content: 45.49 %
Contigs count: 213 Features count: 672 rRNAs count: 4 tRNAs count: 26

Genome completeness

partial RP 0 / 55 BSCG 0 / 51 ASCG 1 / 38
Displaying items 101-150 of 213 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_8_scaffold_6211 175_008_scaffold_6211
Species: Bifidobacterium longum (50%)
2 1108 bp 55.69 2.44 100.18
NECEvent2014_5_8_scaffold_5787 175_008_scaffold_5787
Species: Escherichia coli (50%)
2 1221 bp 53.48 906.27 89.68
NECEvent2014_5_8_scaffold_5029 175_008_scaffold_5029
Species: Enterobacter hormaechei (50%)
2 1481 bp 57.33 5.27 97.03
NECEvent2014_5_8_scaffold_6485 175_008_scaffold_6485
Species: Enterobacter sp. DC4 (50%)
2 1047 bp 52.72 5.44 31.23
NECEvent2014_5_8_scaffold_4720 175_008_scaffold_4720
Species: [Ruminococcus] gnavus (50%)
2 1608 bp 50.00 46.36 14.55
NECEvent2014_5_8_scaffold_4469 175_008_scaffold_4469
Species: human gut metagenome (50%)
2 1713 bp 50.67 118.91 7.53
NECEvent2014_5_8_scaffold_5810 175_008_scaffold_5810
Species: Bifidobacterium thermacidophilum (50%)
2 1215 bp 48.97 5.68 100.49
NECEvent2014_5_8_scaffold_6244 175_008_scaffold_6244
Species: Klebsiella pneumoniae (50%)
2 1101 bp 48.59 142.78 84.47
NECEvent2014_5_8_scaffold_4481 175_008_scaffold_4481
Species: Eggerthella sp. HGA1 (50%)
2 1706 bp 66.71 5.98 95.49
NECEvent2014_5_8_scaffold_6513 175_008_scaffold_6513
Species: Paenibacillus alvei (50%)
2 1041 bp 35.06 4.47 99.71
NECEvent2014_5_8_scaffold_4746 175_008_scaffold_4746
Species: RBG_13_Deltaproteobacteria_52_11_curated (50%)
2 1598 bp 68.84 4.79 98.37
NECEvent2014_5_8_scaffold_5828 175_008_scaffold_5828
Species: Klebsiella pneumoniae (100%)
2 1207 bp 49.71 6.71 70.34
NECEvent2014_5_8_scaffold_6003 175_008_scaffold_6003 2 1161 bp 29.63 14.99 19.21
NECEvent2014_5_8_scaffold_3982 175_008_scaffold_3982
Species: Clostridium butyricum (50%)
2 1974 bp 27.41 19.30 76.75
NECEvent2014_5_8_scaffold_3731 175_008_scaffold_3731
Species: Klebsiella oxytoca (50%)
2 2129 bp 60.45 113.57 99.91
NECEvent2014_5_8_scaffold_4501 175_008_scaffold_4501
Species: Enterobacter cloacae (100%)
2 1697 bp 58.69 4.68 91.40
NECEvent2014_5_8_scaffold_6269 175_008_scaffold_6269
Species: Coprobacillus sp. 3_3_56FAA (100%)
2 1095 bp 30.32 3.29 98.08
NECEvent2014_5_8_scaffold_5076 175_008_scaffold_5076
Species: Paenibacillus curdlanolyticus (50%)
2 1464 bp 32.79 5.64 82.79
NECEvent2014_5_8_scaffold_5077 175_008_scaffold_5077
Species: Clostridium pasteurianum (50%)
2 1463 bp 27.41 6.25 93.71
NECEvent2014_5_8_scaffold_6538 175_008_scaffold_6538
Species: Clostridium sp. CAG:411 (50%)
2 1035 bp 35.17 2.61 95.94
NECEvent2014_5_8_scaffold_5086 175_008_scaffold_5086
Species: Corynebacterium striatum (50%)
2 1459 bp 60.59 5.55 91.30
NECEvent2014_5_8_scaffold_5087 175_008_scaffold_5087
Species: Enterobacter hormaechei (50%)
2 1459 bp 54.01 5.24 71.76
NECEvent2014_5_8_scaffold_3753 175_008_scaffold_3753
Species: Peptoclostridium difficile (50%)
2 2120 bp 60.75 5.59 92.83
NECEvent2014_5_8_scaffold_3243 175_008_scaffold_3243
Species: Eggerthella lenta (100%)
2 2514 bp 67.90 4.95 100.12
NECEvent2014_5_8_scaffold_5607 175_008_scaffold_5607
Species: Roseburia inulinivorans (50%)
2 1280 bp 66.72 5.98 83.67
NECEvent2014_5_8_scaffold_6300 175_008_scaffold_6300
Species: Bacillus cereus (50%)
2 1083 bp 36.29 4.99 91.14
NECEvent2014_5_8_scaffold_6308 175_008_scaffold_6308
Species: Propionibacterium sp. KPL2005 (50%)
2 1080 bp 65.83 3.89 100.28
NECEvent2014_5_8_scaffold_6315 175_008_scaffold_6315
Species: Enterobacter cloacae (50%)
2 1078 bp 59.09 4.59 99.91
NECEvent2014_5_8_scaffold_5887 175_008_scaffold_5887
Species: Enterobacter sp. 35683 (100%)
2 1191 bp 54.58 6.17 92.19
NECEvent2014_5_8_scaffold_4809 175_008_scaffold_4809
Species: Peptostreptococcus sp. MV1 (50%)
2 1569 bp 28.49 4.40 29.64
NECEvent2014_5_8_scaffold_5129 175_008_scaffold_5129
Species: Eggerthella lenta (100%)
2 1443 bp 65.70 6.34 75.47
NECEvent2014_5_8_scaffold_6072 175_008_scaffold_6072
Species: Enterobacter aerogenes (50%)
2 1142 bp 49.91 208.98 93.78
NECEvent2014_5_8_scaffold_4051 175_008_scaffold_4051
Species: Paenibacillus polymyxa (50%)
2 1933 bp 51.16 5.51 73.10
NECEvent2014_5_8_scaffold_6587 175_008_scaffold_6587
Species: Enterobacter cloacae (50%)
2 1025 bp 55.22 4.10 96.59
NECEvent2014_5_8_scaffold_5903 175_008_scaffold_5903
Species: Paenibacillus sp. HGF5 (50%)
2 1188 bp 28.79 2.53 91.92
NECEvent2014_5_8_scaffold_5906 175_008_scaffold_5906
Species: Anoxybacillus flavithermus (50%)
2 1187 bp 30.75 5.69 76.83
NECEvent2014_5_8_scaffold_4317 175_008_scaffold_4317
Species: Clostridium perfringens (100%)
2 1785 bp 22.07 3.11 69.24
NECEvent2014_5_8_scaffold_4576 175_008_scaffold_4576
Species: Enterobacter cloacae (100%)
2 1667 bp 56.63 8.37 76.12
NECEvent2014_5_8_scaffold_6090 175_008_scaffold_6090
Species: Bifidobacterium breve (100%)
2 1136 bp 58.71 3.17 85.56
NECEvent2014_5_8_scaffold_6603 175_008_scaffold_6603
Species: Enterobacter cloacae (100%)
2 1021 bp 57.30 5.29 76.40
NECEvent2014_5_8_scaffold_6606 175_008_scaffold_6606
Species: Bifidobacterium breve (100%)
2 1021 bp 56.32 3.23 85.21
NECEvent2014_5_8_scaffold_6610 175_008_scaffold_6610
Species: Klebsiella pneumoniae (100%)
2 1019 bp 59.96 4.86 94.50
NECEvent2014_5_8_scaffold_6358 175_008_scaffold_6358
Species: Klebsiella pneumoniae (100%)
2 1070 bp 56.26 5.61 99.81
NECEvent2014_5_8_scaffold_5672 175_008_scaffold_5672
Species: Enterobacter sp. 35027 (50%)
2 1258 bp 47.22 6.44 46.26
NECEvent2014_5_8_scaffold_5931 175_008_scaffold_5931
Species: Bifidobacterium breve (100%)
2 1181 bp 60.12 2.79 78.75
NECEvent2014_5_8_scaffold_6121 175_008_scaffold_6121
Species: Enterobacter cloacae (100%)
2 1128 bp 55.76 3.86 88.30
NECEvent2014_5_8_scaffold_5947 175_008_scaffold_5947
Species: Enterobacter cloacae (100%)
2 1175 bp 58.72 4.85 98.30
NECEvent2014_5_8_scaffold_2564 175_008_scaffold_2564
Species: Eggerthella lenta (100%)
2 3241 bp 58.59 7.13 97.84
NECEvent2014_5_8_scaffold_6125 175_008_scaffold_6125
Species: Escherichia coli (50%)
2 1126 bp 55.15 5.20 97.78
NECEvent2014_5_8_scaffold_5955 175_008_scaffold_5955
Species: BJP_IG2069_Syntrophobacterales_47_18 (50%)
2 1174 bp 66.10 5.49 98.64
Displaying items 101-150 of 213 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.