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NECEvent2014_3_3_scaffold_74_27

Organism: NECEvent2014_3_3_Citrobacter_KTE32-rel_52_94_partial

partial RP 35 / 55 MC: 3 BSCG 32 / 51 ASCG 12 / 38 MC: 2
Location: comp(30675..31133)

Top 3 Functional Annotations

Value Algorithm Source
Redox-sensitive transcriptional activator soxR n=2 Tax=Citrobacter RepID=R8VPN2_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 152.0
  • Bit_score: 307
  • Evalue 9.70e-81
  • rbh
Redox-sensitive transcriptional activator soxR {ECO:0000313|EMBL:EOQ44667.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 152.0
  • Bit_score: 307
  • Evalue 1.40e-80
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 98.7
  • Coverage: 152.0
  • Bit_score: 304
  • Evalue 1.80e-80

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Taxonomy

Citrobacter sp. KTE151 → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGGAAAAGAAATTACCCCGAATAAAAGCGCTGCTCACGCCTGGTGAAGTCGCAAAGCGTAGCGGCGTGGCGGTATCAACCCTGCATTTCTATGAAAGCAAAGGGTTAATCAGCAGTATGCGCAACAGCGGCAATCAGCGCCGATACAGACGTGATGTGTTGCGTTATGTGGCGATTATCAAGATTGCTCAACGCATCGGGATCCCGTTGGCAACGATCGGTGACGCGCTCGGCGTATTACCTGAAGGACATTCGCTCAGTGCTAAAGAGTGGAAGCAGCTCTCTTCGCAATGGCGTGAAGAGCTGGATCGACGCATTCATACTTTAGTGGCGCTACGCGATGAACTGGATGGGTGTATTGGTTGCGGTTGTTTGTCGCGCAGCGATTGCCCGTTGCGTAACCCAGGCGATCAGCTTGGCGAGAAGGGGACCGGGGCGCGTCTGCTGGAAGATGATTGA
PROTEIN sequence
Length: 153
MEKKLPRIKALLTPGEVAKRSGVAVSTLHFYESKGLISSMRNSGNQRRYRRDVLRYVAIIKIAQRIGIPLATIGDALGVLPEGHSLSAKEWKQLSSQWREELDRRIHTLVALRDELDGCIGCGCLSRSDCPLRNPGDQLGEKGTGARLLEDD*