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NECEvent2014_3_3_scaffold_226_13

Organism: NECEvent2014_3_3_Citrobacter_KTE32-rel_52_94_partial

partial RP 35 / 55 MC: 3 BSCG 32 / 51 ASCG 12 / 38 MC: 2
Location: comp(23478..24269)

Top 3 Functional Annotations

Value Algorithm Source
Inner membrane protein ypjD n=10 Tax=Citrobacter RepID=C1MA93_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 263.0
  • Bit_score: 517
  • Evalue 8.20e-144
  • rbh
Inner membrane protein ypjD {ECO:0000313|EMBL:ETX69938.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundi similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 263.0
  • Bit_score: 517
  • Evalue 1.10e-143
membrane protein similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 263.0
  • Bit_score: 512
  • Evalue 9.70e-143

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGCCCGTTTTTGCTCTGCTCGCCCTTGTCGCCTACTCAGTCAGCCTCGCGCTGATTATTCCCGCTCTGCTGCAAAAAAACAGCGGCTGGCGGCGTATGGCTATTCTCTCTGCGGTCGTCGCGCTGGTAAGTCATGCTATCGCCCTGGAAGCGCGAATTCTGCCCGGCGGTGAAAGCGGACAAAACCTGAGTCTGTTGAACGTCGGCTCACTGGTTAGCCTGATGATCTGTACGGTAATGACTATCGTCGCTTCCCGCAATCGTGGCTGGCTATTGCTGCCCATTGTCTACGCCTTTGCGCTAATCAACCTGGCCTTCGCCACGTTTATGCCGAACGAGTTCATCACCCATCTCGAAGCTACACCGGGCATGATGATTCACATCGGGCTATCGCTATTCGCTTACGCCACGCTGATTATCGCCGCACTGTATGCGCTGCAACTGGCATGGATCGACTACCAGTTGAAAAACAAAAAACTGGCCTTCAGCAATGAGATGCCGCCGCTAATGAGTATTGAGCGGAAAATGTTTCATATCACCCAAATTGGCGTGGTTCTGCTGACGCTCACCCTGTGCACTGGCCTGTTTTACATGCATAACCTGTTCAGTACCGAGAACATTGATAAAGCCGTTCTCTCTATCGTGGCATGGTTTGTCTATATCGTTCTGTTGTGGGGGCATTACCATGAAGGCTGGCGCGGACGTCGCGTCGTATGGTTTAACGTCGCAGGCGCAGGCATTCTAACGCTGGCCTATTTCGGCAGTCGTATCCTGCAGCAGTTCGTGAGTTAA
PROTEIN sequence
Length: 264
MPVFALLALVAYSVSLALIIPALLQKNSGWRRMAILSAVVALVSHAIALEARILPGGESGQNLSLLNVGSLVSLMICTVMTIVASRNRGWLLLPIVYAFALINLAFATFMPNEFITHLEATPGMMIHIGLSLFAYATLIIAALYALQLAWIDYQLKNKKLAFSNEMPPLMSIERKMFHITQIGVVLLTLTLCTGLFYMHNLFSTENIDKAVLSIVAWFVYIVLLWGHYHEGWRGRRVVWFNVAGAGILTLAYFGSRILQQFVS*