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NECEvent2014_3_3_scaffold_159_28

Organism: NECEvent2014_3_3_Klebsiella_oxytoca_55_54_partial

partial RP 30 / 55 MC: 4 BSCG 25 / 51 ASCG 11 / 38 MC: 3
Location: comp(27452..31018)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=883120 species="Bacteria; Pr similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 999.99
  • Bit_score: 2350
  • Evalue 0.0
Transcription-repair-coupling factor n=2 Tax=Klebsiella oxytoca RepID=H3M3L5_KLEOX similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 999.99
  • Bit_score: 2350
  • Evalue 0.0
  • rbh
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 999.99
  • Bit_score: 2256
  • Evalue 0.0

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Taxonomy

Klebsiella oxytoca → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3567
ATGACCTTTGCGATACGGGTTGGCGAATCCTGGTCGATCGCTGATAATCAGACTATTGAATATCAGCGAGTTGCCCTCCATATCGGCAGAGCGAATCCTCAAGAGATCATGATACCGTCTATGCCTGAACAATACCGATACTCTCTGCCGGTTAAAGCCGGCGATCAGCGCCAGCTTGGCGAACTGACCGGCGCGGCCTGCGCCACTCTGGTGGCTGAAATGGCCGAGCGCCACGGCGGCCCGGTGGTACTGATAGCCCCCGATATGCAGAACGCCCTGCGTCTGAATGATGAAATCAGGCAGTTTACCGACAGCATGGTAGCAGGCCTGGCGGACTGGGAAACGCTCCCCTACGATAGCTTCTCTCCGCACCAGGATATTATCTCTTCACGTCTCGCCACCCTGTACCAGCTCCCGACCATGGAACGCGGCGTGCTGATCGTCCCGGTCAGCACTCTCATGCAGCGCGTCTGTCCGCATAATTTCCTCCACGGCCACGCGCTGGTGATGAAAAAAGGCCAGCGGCTGTCGCGGGATGCGCTGCGCTCGCAGCTGGATAGCGCCGGCTATCGTCACGTCGATCAGGTCATGGAGCACGGCGAGTACGCCACGCGCGGCGCATTGCTTGATCTGTTTCCGATGGGCAGCGAGCAGCCCTACCGTCTCGATTTTTTTGATGATGAGATCGATAGCCTGCGTCTGTTCGACGTCGACAGCCAGCGAACGCTGGAGGAAGTCGCCAGTATCAACCTGCTTCCGGCGCACGAATTCCCGACCGACCAGGCCGCTATCGAGCTGTTTCGCAGCCAGTGGCGCGACCGCTTCGAGGTTAAGCGCGACGCCGAGCATGTTTATCAGCAGGTCAGTAAAGGCACGCTGCCTGCGGGGATCGAATACTGGCAGCCGCTGTTCTTTAACGAACCGCTGCCGCCGCTGTTCAGCTATTTCCCGGCGAAAACGCTGATCGTCAACACCGGCGATCTCGAAGCCAGCGCCGAACGCTTCCAGAATGAAACCCGCGCTCGCTTTGAAAATCGCGGCGTTGATCCGATGCGTCCGCTTTTGCCGCCGGAGCAGCTGTGGCTGCGCAGCGATGAACTGTTCAGCGAGCTGAAAAAATGGCCGCGCGTGCAGCTCAAAACCGAACGCCTGGCGGAGAAGGCCGCTAATACTAATCTCGGCTACCAAAAATTACCCGAGCTGGCGATTCAGGCGCAGAACAAAGCGCCGCTGGATAACCTGCGCCGATTCCTCGAATCCTTTAGCGGGCCGGTGATTTTCTCGGTTGAGAGCGAGGGACGCCGCGAAGCACTCGGTGAAATGCTGGCCCGCATCAAGATCGCGCCAAAGCATATTTTGCGTCTTGAAGAGGCAACGGCTAACGGCCGCTATCTGATGATCGGCGCCGCCGAGCATGGCTTTATTGATAGCCAGCGCAACCTGGCGCTGATTTGCGAAAGCGACCTGCTGGGCGAGCGCGTTGCCCGCCGTCGTCAGGATTCACGCCGCACCATCAATCCGGATACGTTGATTCGTAACCTGGCGGAGCTGCATATCGGTCAGCCGGTGGTGCATCTGGAGCATGGAGTTGGGCGCTATGCCGGAATGACGACCCTTGAAGCGGGCGGCATTAATGGCGAATACCTGATGCTGACCTACGCCAATGACGCCAAGCTGTACGTCCCGGTGTCCTCACTGCATCTGATTAGCCGCTATGCGGGCGGGGCGGAAGAGAATGCGCCGCTGCATAAACTGGGCGGCGACGTCTGGGCGCGAGCGCGGCAGAAAGCGGCCGAGAAAGTGCGCGACGTGGCCGCCGAGCTGCTGGATATCTATGCCCAGCGCGCGGCGAAAGCCGGCTATGCGTTTAAACATGATAAACAGCAGTATCAGCTGTTTTGCGACAGCTTCCCGTTCGAGACCACGCCCGACCAGGCGCAGGCTATTAACGCCGTCCTGAGCGATATGTGCCAGCCTCTGGCGATGGACCGTCTGGTGTGCGGCGATGTTGGCTTCGGCAAAACGGAAGTGGCGATGCGCGCCGCTTTCCTGGCGGTCGAAAACCATAAGCAGGTGGCGGTGCTGGTGCCAACCACCCTGCTCGCCCAGCAGCACTTCGATAACTTCCGCGATCGCTTTGCTAACTGGCCGGTGCGTATTGAGATGCTTTCGCGCTTTCGCAGCGCCAAAGAGCAGGCGCAGATCCTTGAGCAAGTCGCGGAAGGAAAAATCGATATTCTTATCGGCACCCATAAACTGCTGCAGCCGGACGTTAAGCTGCGCGATCTCGGTCTCCTGATTGTTGATGAAGAGCACCGCTTTGGCGTGCGTCACAAAGAGCGCATCAAGGCAATGCGCGCCGACGTCGATATCCTGACCCTGACCGCGACGCCTATTCCGCGCACGCTGAATATGGCGATGAGCGGTATGCGCGATCTTTCGATCATCGCCACGCCGCCCGCCCGCCGTCTGGCGGTCAAAACCTTCGTTCGCGAATATGACGCGCTGGTGGTACGCGAAGCGATCCTGCGTGAGGTACTGCGCGGCGGCCAGGTTTACTACCTCTATAATGACGTGGAAAACATCCAGAAAGCCGCCGAGAGGCTGGCGGAGCTGGTGCCGGAAGCGCGCATTACCATCGGTCATGGACAGATGCGCGAGCGCGAGCTTGAGCGGGTGATGAACGATTTCCATCACCAGCGTTTTAACGTGCTGGTCTGTACCACCATTATCGAAACCGGGATCGACATACCCACGGCGAACACCATTATTATCGAGCGTGCCGATCACTTCGGCCTGGCTCAGCTGCATCAGCTACGCGGACGCGTTGGCCGGTCGCACCATCAGGCCTATGCCTGGCTGCTGACGCCGCATCCGAAAGCGATGACTCCCGATGCGCAAAAACGCCTTGAGGCTATTGCATCGCTGGAAGATCTCGGCGCTGGCTTTGCGCTGGCGACCCATGACCTCGAAATTCGCGGCGCGGGCGAGCTGCTGGGCGAAGATCAGAGCGGTTCTATGGAAACCATCGGCTTCTCCCTCTATATGGAGCTACTGGAAAACGCCGTTGACGCGCTGAAGGCCGGGCGCGAGCCCTCGCTGGAGGATCTCACCAGCCAGCAGACCGAAGTTGAGCTACGGATGCCGTCGCTGCTGCCGGACGACTTTATCCCGGATGTGAATACTCGCCTGTCGTTCTACAAACGCATTGCCAGCGCGAAGAGTGAGAATGAGCTGGAGGAGATCAAAGTCGAACTTATCGATCGCTTTGGCCTGCTGCCGGATCCGGCCCGCAATCTGCTCGATATCGCCCGGCTGCGCCAGCAGGCGCAGAAGCTGGGGATCCGCAAGCTTGAGAGCAACGAAAAAGGCGGCACCATTGAGTTTAACGAGAAGAATAACGTTAATCCGATGTGGCTGATTGGCCTGCTGCAGAAGCAGCCGCAGCACTATCGACTGGATGGCCCGACGCGCCTCAAATTTACGCAGGACCTCGCCGAGCGTAAAACGCGGATGGACTGGGTGCGCCAGTTTATGCTTCAGCTGGAAGAGAACGCCACCGCTTAA
PROTEIN sequence
Length: 1189
MTFAIRVGESWSIADNQTIEYQRVALHIGRANPQEIMIPSMPEQYRYSLPVKAGDQRQLGELTGAACATLVAEMAERHGGPVVLIAPDMQNALRLNDEIRQFTDSMVAGLADWETLPYDSFSPHQDIISSRLATLYQLPTMERGVLIVPVSTLMQRVCPHNFLHGHALVMKKGQRLSRDALRSQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSEQPYRLDFFDDEIDSLRLFDVDSQRTLEEVASINLLPAHEFPTDQAAIELFRSQWRDRFEVKRDAEHVYQQVSKGTLPAGIEYWQPLFFNEPLPPLFSYFPAKTLIVNTGDLEASAERFQNETRARFENRGVDPMRPLLPPEQLWLRSDELFSELKKWPRVQLKTERLAEKAANTNLGYQKLPELAIQAQNKAPLDNLRRFLESFSGPVIFSVESEGRREALGEMLARIKIAPKHILRLEEATANGRYLMIGAAEHGFIDSQRNLALICESDLLGERVARRRQDSRRTINPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEAGGINGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDVWARARQKAAEKVRDVAAELLDIYAQRAAKAGYAFKHDKQQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVENHKQVAVLVPTTLLAQQHFDNFRDRFANWPVRIEMLSRFRSAKEQAQILEQVAEGKIDILIGTHKLLQPDVKLRDLGLLIVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDALVVREAILREVLRGGQVYYLYNDVENIQKAAERLAELVPEARITIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTPDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEDQSGSMETIGFSLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKSENELEEIKVELIDRFGLLPDPARNLLDIARLRQQAQKLGIRKLESNEKGGTIEFNEKNNVNPMWLIGLLQKQPQHYRLDGPTRLKFTQDLAERKTRMDWVRQFMLQLEENATA*