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NECEvent2014_3_3_scaffold_4098_1

Organism: NECEvent2014_3_3_Klebsiella_oxytoca_55_54_partial

partial RP 30 / 55 MC: 4 BSCG 25 / 51 ASCG 11 / 38 MC: 3
Location: comp(1..870)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 290.0
  • Bit_score: 581
  • Evalue 9.30e-163
DNA-directed RNA polymerase subunit beta' n=1 Tax=Salmonella enterica subsp. enterica serovar Montevideo str. 8387 RepID=V1U8U5_SALMO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 290.0
  • Bit_score: 582
  • Evalue 2.30e-163
rpoC; DNA-directed RNA polymerase, beta'-subunit similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 290.0
  • Bit_score: 581
  • Evalue 1.90e-163

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Taxonomy

Salmonella enterica → Salmonella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
GTGAAAGACTTATTAAAGTTTCTGAAAGCGCAAACTAAAACCGAAGAGTTTGATGCGATCAAAATTGCTCTGGCATCGCCAGACATGATCCGTTCATGGTCTTTTGGTGAAGTTAAAAAGCCGGAAACCATTAACTACCGTACGTTCAAACCTGAGCGTGACGGCCTTTTCTGCGCGCGTATTTTCGGGCCAGTAAAAGACTACGAGTGCCTGTGCGGTAAGTACAAGCGCCTGAAACACCGCGGTGTGATCTGTGAGAAGTGCGGCGTTGAAGTGACCCAGACTAAAGTGCGCCGTGAGCGTATGGGCCACATCGAGCTGGCGTCTCCGACCGCTCATATCTGGTTCCTGAAGTCTCTGCCGTCCCGTATCGGCCTGCTTCTCGATATGCCGCTGCGCGATATCGAACGCGTGCTGTACTTCGAATCCTATGTGGTTATCGAAGGCGGTATGACCAACCTGGAACGCCAGCAGATCCTGACTGAAGAACAGTATCTGGACGCGCTGGAAGAGTTCGGTGACGAATTTGACGCGAAGATGGGTGCGGAAGCTATCCAGGCCCTGCTGAAGAGCATGGATCTGGAGCAAGAGTGTGAAACTCTGCGCGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTAAGAAGCTGACCAAGCGTATCAAACTGCTGGAAGCGTTCGTACAGTCTGGCAACAAGCCGGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTTGCGACTTCTGACCTGAACGATCTGTATCGTCGCGTCATTAACCGTAACAACCGTCTGAAACGTCTGCTGGATCTGGCTGCGCCGGACATC
PROTEIN sequence
Length: 290
VKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERQQILTEEQYLDALEEFGDEFDAKMGAEAIQALLKSMDLEQECETLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDI