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NECEvent2014_3_3_scaffold_12_14

Organism: NECEvent2014_3_3_Paenibacillus_dendritiformis-rel_55_70

near complete RP 48 / 55 MC: 3 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 2
Location: 10884..11552

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 n=1 Tax=Paenibacillus sp. HGF5 RepID=F3MA54_9BACL similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 205.0
  • Bit_score: 230
  • Evalue 1.70e-57
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:ETT36471.1}; TaxID=1227076 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus s similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 202.0
  • Bit_score: 230
  • Evalue 1.80e-57
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 192.0
  • Bit_score: 217
  • Evalue 3.20e-54

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Taxonomy

Paenibacillus sp. FSL R5-808 → Paenibacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 669
GTGTTGACCAAACAGCATATGGAGCAGTTAGTTCTGCTCGCCCAGCGCGGCGATGCGGATGCTTTCAGCAGGCTGATCGTCGCCTATGAGAGCAGTCTGTATCGGTTGGCCCGTTCATATCTGAAACGGCAGGAGGATTGCGCAGATGCGGTCCAGGAGACGGTATTCAAATCGTTCCGGGCGATACGCTCCCTTAAAGAACCGGCTTACTTCAAGACTTGGCTGTTCCGGATTCTCGTCCATGAATGCTGCCAGCTGCTGCGAGAACGCAAGCGGAATCCGATCGCGAAGCCGGCGGAATGGGATGCGGCCGAGGCCAGAGATCCCTTCCACGCCATTGAACTGAAGGAAGCGGTAACGTATCTGGAGCATGATCTGCGCAAGATTGTTCAGCTTTACTATTATAAAGATATGACGATCCGGCAAATAGCCAAGGCGGCGGGCGTCCCGGAGGGGACCGTGAAATCCCGGCTGCACCGGGCTCGCGAGCTGTTGGCGGAAATCTTAGAATCCCCTGAAGAAAGGAACGTGGACCATGACCCGACAGTAAACCCGGAGCTTGGTTACAGCAACCTTGCTCCGCTGCCTCGCGTTGCGCGGAAGCGAATCAGACTCAGCGAGCTGCTTTGCCTTCCCGCAGAGGCAGATTTCATCATCACAGCGTCATAA
PROTEIN sequence
Length: 223
VLTKQHMEQLVLLAQRGDADAFSRLIVAYESSLYRLARSYLKRQEDCADAVQETVFKSFRAIRSLKEPAYFKTWLFRILVHECCQLLRERKRNPIAKPAEWDAAEARDPFHAIELKEAVTYLEHDLRKIVQLYYYKDMTIRQIAKAAGVPEGTVKSRLHRARELLAEILESPEERNVDHDPTVNPELGYSNLAPLPRVARKRIRLSELLCLPAEADFIITAS*