ggKbase home page

NECEvent2014_3_3_scaffold_23_10

Organism: NECEvent2014_3_3_Paenibacillus_dendritiformis-rel_55_70

near complete RP 48 / 55 MC: 3 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 2
Location: 10301..11917

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SHZ2_9BACL similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 536.0
  • Bit_score: 998
  • Evalue 2.50e-288
  • rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:EHQ61304.1}; TaxID=1131935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus dendriti similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 538.0
  • Bit_score: 998
  • Evalue 2.60e-288
btr; HTH-type transcriptional activator Btr similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 532.0
  • Bit_score: 593
  • Evalue 5.20e-167

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Paenibacillus dendritiformis → Paenibacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1617
TTGCGAACCACAATGATGGACCCTGAACATATTTGCCGCTGCTTGGAGCAATTCTGGTTCAAGCTGCGCGGCGTTGATATTGCGCGCTTCGGACGTATGGAGCCGCAGTTGCTGAGCACGTATGTCCTCGTCCTGTCCAAGCATGGCGAAGGCCGCCTGGTCATTGACTACGCCGAATATCGGCTGGGGGAGGGAGCCGTTCATGTCGCCGCGCCGGGACAGACGATCGGCATGACGGCGGAAGAAGGGCAGGAGGCCGAAGCGTATGTGATTCGCTTCGATATCCGCTCCGATGCGGAGCCGGAGGCGGAATTTCCGCTGCGCGGGGAGGTGCCGGTGCATCGGGAAGCGCCGACCGTCGTGCTCTGTGAAATACTGTATGGCAAGAGCCGGTCCGAGCTAAGGGCGGAACGTCTGCTCGCTCAAGCGGCCTTCCACGAGCTGATGTGCGGAGTGGCCGCCAATATTCGCCGGCTGCCCGGCGATCCGCGGGCGACCCTGGAGCGAACGAAGGCGTACATCGACAATCATTTCAACGAGAATCTGACGATTGGGAAGCTGGCGCGGATGGCCGATATCAGTCCGAAGTACTACGTCGATCTTTTCAAAAAAACATACGGACAAAGCACGATCGATTATATTACGGAAATAAGGATCCGCCATGCGAAGCGGATGATGCTGCAGGCGGATGCCCGGGTACGGGAGATTGCCCAGCAGGTCGGTTACAGCGACGAATTTTATTTCAGCCGCAAGTTCAAGCAGCAAATCGGCGTCGCCCCGACCGTCTATATGAAAAAACGGCGGCGCAAAATCGTTGCCTATACGCCGGGGGTTGCCGGCCATATGCTTGCACTCGGGCAAACTCCGTACGCCGCGCCGCTTCATCCGAAATGGACGGCTCATTATTATGAGAAATATCGCTATGATATCCCGCATCATCTGAGCGCCTATCGCTACAATAAGGATTGGAGAACCAACATCGAGGCGTTATGCGCCGCCAAGCCGGAGCTCATCATTTGCGACTCGGAATATTTGCAGCCGGAAGAGAAGCGCTGTCTGGAAAGCGTGGCCGAGGTGAAATATATTTCCGGCCGGGAGCACAACTGGCGGGAGCAATTCAGCCTGATCGCCCGGTACATCGGTGCTGAGCCGGAGGCGGAAAGCTGGTTGTCCGCTTACGAGCAGAAGGCGGCTGCCGCCAGGGAGCGTCTGCAGGAGCTGCTGTCCGGCGAGGCGTTTTTTATGATGTGCATTCACAAAGATTGCTGTTATCCTTGCACCTGCCGCGGAATGAATGAAATGCTGTACCAGGAGCTGCAGTTGAACAGAGCGCCGTATTCGGGCGGGAATGCAGGCAGACAGGCGGTCAGTCTGGAAGAACTGGCGCGTCTGGAGCCCGATCGCATCTTGCTGAACGTATGCCAGGAGCAGGAATCGCTGCAGACATGGCAAGCTGTCCAGACTTCACGCTTATGGTCCGATCTGAAGGCCGCGCGGCGCAATCATGTCTATCTTATTTCTTCCGATCCGTGGCGGGAATACTCGGCATATGCTTGCGAGCGGATGATCGACGATCTGATGAAGCAGCTTGCGCACGAGCTTGGGACGGAGAAATAG
PROTEIN sequence
Length: 539
LRTTMMDPEHICRCLEQFWFKLRGVDIARFGRMEPQLLSTYVLVLSKHGEGRLVIDYAEYRLGEGAVHVAAPGQTIGMTAEEGQEAEAYVIRFDIRSDAEPEAEFPLRGEVPVHREAPTVVLCEILYGKSRSELRAERLLAQAAFHELMCGVAANIRRLPGDPRATLERTKAYIDNHFNENLTIGKLARMADISPKYYVDLFKKTYGQSTIDYITEIRIRHAKRMMLQADARVREIAQQVGYSDEFYFSRKFKQQIGVAPTVYMKKRRRKIVAYTPGVAGHMLALGQTPYAAPLHPKWTAHYYEKYRYDIPHHLSAYRYNKDWRTNIEALCAAKPELIICDSEYLQPEEKRCLESVAEVKYISGREHNWREQFSLIARYIGAEPEAESWLSAYEQKAAAARERLQELLSGEAFFMMCIHKDCCYPCTCRGMNEMLYQELQLNRAPYSGGNAGRQAVSLEELARLEPDRILLNVCQEQESLQTWQAVQTSRLWSDLKAARRNHVYLISSDPWREYSAYACERMIDDLMKQLAHELGTEK*