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NECEvent2014_3_3_scaffold_128_17

Organism: NECEvent2014_3_3_Paenibacillus_dendritiformis-rel_55_70

near complete RP 48 / 55 MC: 3 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 2
Location: 18630..19400

Top 3 Functional Annotations

Value Algorithm Source
FliA/WhiG subfamily RNA polymerase sigma-28 factor n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SGI8_9BACL similarity UNIREF
DB: UNIREF100
  • Identity: 96.5
  • Coverage: 256.0
  • Bit_score: 476
  • Evalue 1.60e-131
  • rbh
FliA/WhiG subfamily RNA polymerase sigma-28 factor {ECO:0000313|EMBL:EHQ61825.1}; TaxID=1131935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibaci similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 256.0
  • Bit_score: 476
  • Evalue 2.20e-131
RNA polymerase sigma70 similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 244.0
  • Bit_score: 376
  • Evalue 8.00e-102

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Taxonomy

Paenibacillus dendritiformis → Paenibacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 771
ATGAGCGCGGCCTCCCGGCATGGAACAGCCGAAGACGCGGTTCAACTCATCAGCGCTTATCAGGAGACGCAGGACAACGATATCGCCACCATCCTCATCCAAAAGTACGAGCCCATGGTCAAGATGGCCGCTGGCAAAATTTCGCGCAACCGTCCCGATTTGTACGAAGACCTGATGCAGGTCGGCAATATGGCATTGATCCGTCTGTTGCAGCAATTTGACAGATCCCTGGGCGTGCCCTTCGAAGCTTATGCGATGAAGAGCATGATCGGCCATATGAAAAATTTCCTCCGGGACAAGTCGTGGTATATTCAAGTGCCGCGCCGAATCAAGGAGAAGGGGGCTCTCGTTCAGCAGACGATCGACGAATTGACCGTTCAGCTGGAACGTTCCCCGAACGTGGAGGAGATTGCGGAGCGGCTGGAATTATCCGTGGAGGAGACTGTCGAGGTATTGGCGGGCCGGGAATGCTATCACTATGTGTCGCTGGACACGCCATTGTCGCAGGAAGAGAGCGCCGCGACGCTGGGGGAGCTGATCAGCTCGGACAGCGACGATTACGAAGCCGTCGAGCGCCGGATGGATCTGAGCGATGCGATGGCAGCGCTTAAAGCGGAAGAGCGGCAGGTGCTTGCCCTGGTCTTCGGGGAAGGGCTGTCCCAGCGAGCGGCAGCCGAACGGCTCGGGGTATCCCAGATGAGCGTCTCGCGGATTCAACGCAGAGCCACGGACAAGCTCCGGCATATTCTTTCCTCCCGTTATGACGCATAG
PROTEIN sequence
Length: 257
MSAASRHGTAEDAVQLISAYQETQDNDIATILIQKYEPMVKMAAGKISRNRPDLYEDLMQVGNMALIRLLQQFDRSLGVPFEAYAMKSMIGHMKNFLRDKSWYIQVPRRIKEKGALVQQTIDELTVQLERSPNVEEIAERLELSVEETVEVLAGRECYHYVSLDTPLSQEESAATLGELISSDSDDYEAVERRMDLSDAMAALKAEERQVLALVFGEGLSQRAAAERLGVSQMSVSRIQRRATDKLRHILSSRYDA*