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NECEvent2014_3_3_scaffold_160_5

Organism: NECEvent2014_3_3_Paenibacillus_dendritiformis-rel_55_70

near complete RP 48 / 55 MC: 3 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 2
Location: 4684..5760

Top 3 Functional Annotations

Value Algorithm Source
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Rumino similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 354.0
  • Bit_score: 406
  • Evalue 5.00e-110
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DFL5_CLOTH similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 354.0
  • Bit_score: 406
  • Evalue 3.60e-110
  • rbh
ribosome small subunit-dependent GTPase A similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 354.0
  • Bit_score: 406
  • Evalue 1.00e-110

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Taxonomy

Ruminiclostridium thermocellum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1077
ATGAACACTTTTACACTACGTGACTACGGCTTCACGCCGCAACATGATCCCCTACACACAGATGGAACCTACGCAAGGGTTACCGCTGTGCATAAACAACATTACAGCCTCATAACCGAGCAGGGGGAATGCCTTGCGCGACTGAAGGCGGGTATCTACTTCAACAACTGTACCGAAGAATTCCCTACCACCGGGGATTTCGTGCAAATTCAATATAATCCCGACGGCGAAAGCCTGATTATCAGAACGCTGCCACGCAAATCGAAATTTGCTCGAAATGACTTATCCGGTCATGCGGCTAACTTTGCAAAGACCGTAAAAGAGCAGACGGTGGCCGCCAATTTCGACTACGTATTCATCATGCAATCGCTAAACCATGACTTCAATCCGCGTCGGATTGAACGTTATCTGGCTTTATCATGGCAATCGGGCGCCATTCCCGTTGTCATCCTGACCAAAGCGGATTTGATAACCGATACCTCGGAATATCTTGCGGCGGTGAATCAAATAGCAATCGGGGTTGCGGTTTATGTCATTAGTGCAAAAACCGGTGAGGGCATAGACGGACTTTCCGACTACCTCACAAAAGGGAACACTATTGTGTTTCTCGGCTCTTCCGGTGTAGGAAAATCAAGCCTTGTCAATAAGCTTGCAGGAAAGGAAATGATGAGGGTTAGCGATATCCGCGAGGATGACAGCAAAGGCAAGCATACCACTTCTCATCGCCAATTAATTCTCCTGAGCAGCGGCGTTATGGTCATTGATACGCCGGGGATGCGCGAGCTTGGCATGTGGGAGGCCTCCGAAGGCATCCGTGAAGGATTCTCCGATGTGGAGCGTTACCTGGGTCATTGCAAATTCTCCGACTGCGGGCACGCAGGTGAGCCGGGTTGTGCCGTCAGAGCCGCCATACAAAACGGTGAGTTGCCGAAGGAGCGTTGGGACAGCTATCTCGCTCTCAGAAGGGAAGCCGCATTCGTAGAGGACAAAGCTGCCTATTTGCGCAACAAAACGGCCCAGATCGTGGCTTCAAAAGTAATAGAGAGACAGCAAAAAAGAGGAGGAAAACATAGATGA
PROTEIN sequence
Length: 359
MNTFTLRDYGFTPQHDPLHTDGTYARVTAVHKQHYSLITEQGECLARLKAGIYFNNCTEEFPTTGDFVQIQYNPDGESLIIRTLPRKSKFARNDLSGHAANFAKTVKEQTVAANFDYVFIMQSLNHDFNPRRIERYLALSWQSGAIPVVILTKADLITDTSEYLAAVNQIAIGVAVYVISAKTGEGIDGLSDYLTKGNTIVFLGSSGVGKSSLVNKLAGKEMMRVSDIREDDSKGKHTTSHRQLILLSSGVMVIDTPGMRELGMWEASEGIREGFSDVERYLGHCKFSDCGHAGEPGCAVRAAIQNGELPKERWDSYLALRREAAFVEDKAAYLRNKTAQIVASKVIERQQKRGGKHR*