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NECEvent2014_3_3_scaffold_302_8

Organism: NECEvent2014_3_3_Paenibacillus_dendritiformis-rel_55_70

near complete RP 48 / 55 MC: 3 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 2
Location: 8134..9426

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1131935 speci similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 430.0
  • Bit_score: 839
  • Evalue 1.60e-240
Transcription termination factor Rho n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SLT4_9BACL similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 430.0
  • Bit_score: 839
  • Evalue 1.20e-240
  • rbh
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 433.0
  • Bit_score: 734
  • Evalue 1.50e-209

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Taxonomy

Paenibacillus dendritiformis → Paenibacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1293
ATGGATTTACAAATTTCCGATTTGGAAACGAAGAAATTGACCGAATTATACAAGCTGGCGAAGGAGTTCCAGATTCCGGGCTATGGTCAATTGAAGAAAAAAGAACTGATTTTCGCGATTTTGCGCGCGCAAGCGGAGCAGGGCGGCTACATGTTCATGGAAGGCGTTCTTGACATTCTGCCGGAAGGCTTCGGCTTCCTTCGGCCGATTAACTATTTGCCGAGTGCGGAAGATATTTATATCTCGCAGTCGCAAATTCGTAGATTCGATCTGAGAACGGGGGATGTCGTCTCAGGCAAGTGCCGCCCTCCAAAAGAGAACGAGCGCTATTTCGGTCTGCTCCAGATTAATGCCGTGAATGGCGAAAATCCAGAAGATGCCGCGCAACGGCTGCACTTTCCTGCATTAACTCCTCTTTACCCGCAGAAGAAGCTGGTGCTCGAAACTTCCCCATCCCGCATTTCAACACGGATTATGGATTTGATAGCTCCTGTCGGCTTGGGACAGCGCGGCTTGATCGTCGCGCCGCCTAAGGCCGGGAAGACGTTGCTCTTAAAAGAAATCGCGAACAGCATCTCGGAGAACAATCCTGAAATTGAGTTGTTCGTGCTGCTGATCGACGAGCGCCCGGAAGAAGTCACCGACATGCAGCGTTCCGTCAAGGGCGAAGTCGTGGCATCCACATTCGATGAAGTGCCGGAAAATCATATCAAGGTGGCCGAGTTGGTGCTTGAGCGAGCCCTTCGCCTTGTGGAGCACAAGAAGGACGTCGTTATCCTGCTGGACAGCATCACCCGGCTGGCGCGGGCCTATAACCTGGTTATTCCCCCATCGGGCCGGACGCTGTCGGGCGGTATCGACCCGGCTTCCTTCCACCGTCCGAAGCGCTTCTTCGGTTCGGCGCGCAATATCGAGGAAGGCGGCAGCCTGACCATTCTGGCGACGGCACTGGTCGAGACCGGGTCGCGCATGGATGATATCATCTACGAGGAATTCAAAGGCACAGGAAACATGGAGCTGCACCTGGATCGCAAATTGGCGGAACGGCGCATTTTCCCGGCGATCGATATCCGACGCTCCGGCACGCGCCGCGAGGAGATGCTGCTGTCGAAGGAAGAGCTCGACAAGCTGTGGATGATCCGGAAAAATATGAACGAAACGCCGGAATTCATCGATCAGTTCCTCAAAAAGCTGCGTGATACGAAGACGAACACGGAATTCCTGGCTACGTTGGACGCGAACGGCAACACGCCGACGCCGACGCGCCGTACCCGGAGCACTTCGGTCAGCTAA
PROTEIN sequence
Length: 431
MDLQISDLETKKLTELYKLAKEFQIPGYGQLKKKELIFAILRAQAEQGGYMFMEGVLDILPEGFGFLRPINYLPSAEDIYISQSQIRRFDLRTGDVVSGKCRPPKENERYFGLLQINAVNGENPEDAAQRLHFPALTPLYPQKKLVLETSPSRISTRIMDLIAPVGLGQRGLIVAPPKAGKTLLLKEIANSISENNPEIELFVLLIDERPEEVTDMQRSVKGEVVASTFDEVPENHIKVAELVLERALRLVEHKKDVVILLDSITRLARAYNLVIPPSGRTLSGGIDPASFHRPKRFFGSARNIEEGGSLTILATALVETGSRMDDIIYEEFKGTGNMELHLDRKLAERRIFPAIDIRRSGTRREEMLLSKEELDKLWMIRKNMNETPEFIDQFLKKLRDTKTNTEFLATLDANGNTPTPTRRTRSTSVS*