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NECEvent2014_3_3_scaffold_203_3

Organism: NECEvent2014_3_3_Paenibacillus_dendritiformis-rel_55_70

near complete RP 48 / 55 MC: 3 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 2
Location: comp(4205..5245)

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter MFP subunit n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SPU2_9BACL similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 346.0
  • Bit_score: 631
  • Evalue 5.10e-178
  • rbh
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:EHQ58921.1}; TaxID=1131935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus dend similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 346.0
  • Bit_score: 629
  • Evalue 2.10e-177
acrA; acriflavin resistance protein family transporter subunit AcrA similarity KEGG
DB: KEGG
  • Identity: 33.9
  • Coverage: 251.0
  • Bit_score: 167
  • Evalue 7.70e-39

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Taxonomy

Paenibacillus dendritiformis → Paenibacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1041
GTGAGAAACCGATGGATTGCAGGCTGCCTCGTCGCAGCATTGCTCGGAACGGCGCTGGCGGGATGCAGCAGTCCTCCGGCCGAAGAGCCCGCGCAAGGGGCTCAGCAGGAGAAGGAAACCCCTGTTCAGGTGGCCGCTGTAGAGAAAGGCTCTCTCAGCCAGCACAATGAAATTATCGGGACGGCCAACCCGAGCAGAACCGTCGATATCATTCCGAAGCTGAACGGCGAACTGGTACGCTTGAATGTCAAGAAGGGCGACATCGTCTCCAAGGGGGCGACGCTCGGCATCATTGACGCGGATGATCTAGAAGTCCAGCTAAAGCTGGAGCAGTTCAGCCTGGAGCAGGCGCAAGATCAGTACAAGACACTGCATAACGCCCAAGCATCGGATCTTGAGCTGGATCAAGCGAAGCGCAGCATTGAACAGGCTCAGCTGCGCGTCAAGCAGGCCAGCAACAGGGTGGCGGATGCGACCTTGAAGGCCCCGATGAGCGGACAGGTTATTCGCGTGGCGGCGGAAGCGGGAGAATTCGTCACCTCAACCTCCCCGCTGTTCACGATCGTTTCCACCAATCCGGTGACGTTCTCGGCCAATGTCAGCGCGAATCAGATGCTGTTGCTGCAGAACCGGAAAGAGACGAAGGTCGAAGTGCCGGATGTGGGCAAAACCTTCACTGCCCGGATCACGTATCTGTCCCCCGTCGCCAATGAAGGCGGATTCTACGCGCTCGAGACGCAAGCGGACAATGCGAAGGGCGAGATCAAGCCCGGCATGACAGCGAAGTTCATCGTCGAGCAGGAAGTGTTGAAGGATGCCCTCCTCGTTCCTACGGAAGCGATCGTGGAGAAGAACGGCGCATCGTATGTGTTTGTCGTTAAAAATGGACGAGCCGTCGAAGAAGCCGTGGAAGTGCTGGAATCCCAATCCAAAATGACGGCGGTGAAAGGCAATCTCCAGGCGAATGATCAAATCGTCATCAAGGGACAAATGACCTTATCCGACGGCAATAAAGTGAAACTCATCGAGGGGGCGCGCTAA
PROTEIN sequence
Length: 347
VRNRWIAGCLVAALLGTALAGCSSPPAEEPAQGAQQEKETPVQVAAVEKGSLSQHNEIIGTANPSRTVDIIPKLNGELVRLNVKKGDIVSKGATLGIIDADDLEVQLKLEQFSLEQAQDQYKTLHNAQASDLELDQAKRSIEQAQLRVKQASNRVADATLKAPMSGQVIRVAAEAGEFVTSTSPLFTIVSTNPVTFSANVSANQMLLLQNRKETKVEVPDVGKTFTARITYLSPVANEGGFYALETQADNAKGEIKPGMTAKFIVEQEVLKDALLVPTEAIVEKNGASYVFVVKNGRAVEEAVEVLESQSKMTAVKGNLQANDQIVIKGQMTLSDGNKVKLIEGAR*