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NECEvent2014_3_3_scaffold_171_6

Organism: NECEvent2014_3_3_Bifidobacterium_MSTE12-rel_59_9

near complete RP 52 / 55 MC: 6 BSCG 49 / 51 ASCG 14 / 38
Location: 7569..8789

Top 3 Functional Annotations

Value Algorithm Source
Ribose transport system permease protein RbsC n=2 Tax=Bifidobacterium dentium RepID=D2Q6U7_BIFDB similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 406.0
  • Bit_score: 774
  • Evalue 4.40e-221
  • rbh
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:ETO97638.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 406.0
  • Bit_score: 777
  • Evalue 9.50e-222
rbsC1; ribose transporter permease RbsC similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 406.0
  • Bit_score: 774
  • Evalue 1.20e-221

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Taxonomy

Bifidobacterium sp. MSTE12 → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1221
ATGAGCGCAAGGACCGCGACACCAGCAGCGACGAAGAACAAAACCGGCGGCCTGCTCGCCACCATCGCCAACAACGCACGACAATACGGCATTGTAGGGGCATTGCTCGTTATCGTCATCGTATTCCAGATTCTGACAGGTGGCGTCCTGCTTAAACCGAACAGTTTCGTATCGCTGATTCAACAGAACGCATATGTGATCATTCTGGCCATAGGCATGGTAATGGTCATCATTGCGACCCACATCGATCTTTCGGTCGGTTCGCTCGTGGCTTTCATCGGCGGCGTCTGTGCGTTGCTGATGGAACGACAGGGGGTCAATTGGGGTCTTGCCATCGTCATCTCCCTTGCTGTGGGACTCATCGTCGGCGTCTGGCAGGGTTTCTGGGTCGCCTATGTCGGTATTCCGGGCTTCATCACCACATTGGCCGGCATGCTGATTTTCCGAGGCCTCGCCACCGTCATCGTCGGCGAATCCGTGCCGATCACCTCTGAATCCTTCCGTGACATCGCACGTAATTACCTGCCGAACGTACTCGGATGGTGGGGGCCGTTTGATGGTCTGACCATCGTCTTGGGCATCCTGTGCATTGCGGCGTTCGCGTGGAGCCAATTGCGCAAACGCGCTCGTGCGGAGAGGGTCGGTCTTGTGGCCGAACCGATGAGCCTGACCATCATCAAGATCGTCATCGCGGCTCTTGCCATCGGCTTCGTCACCTACCTGCTTTCCTCCTCCGGAAATGCGGACCAGGGTGGCACTCCGGTTATGCTCGTCATCGTCGGCGTACTGGTGTTGATTTACAACTTCATCTTGACCAAGACCGTGTTCGGTCGTCATGTGTATGCGGTCGGTGGCAATCGTAAGGCGGCTGAGCTGTCCGGCATCAATACCAAGCGTGTGGATTTCACCCTGTTCGTCCATATGGGCTTCCTATCCGCGGTCGCGGCAGTGTGCATGCTCTCCAGACTGGCTTCCGCGACCGCGCAAGCCGGTATGGAATTCGAGATGGACGCCATCGCGGCCTGCTTCATTGGCGGTACTGCGGTAACCGGTGGCATCGGCACCATCCCCGGTGCTGTTGTCGGCGCCTTCGTGATGGGCGTCATCAACCAAGGCCTGTCCATCATGGGTGTCGATACCGCAATCGTGAAGACCATCAAGGGTCTGGTGCTCCTGGGAGCCGTCGCGGTCGACATCATGTCGAAGCGCAAGAAGAGCTGA
PROTEIN sequence
Length: 407
MSARTATPAATKNKTGGLLATIANNARQYGIVGALLVIVIVFQILTGGVLLKPNSFVSLIQQNAYVIILAIGMVMVIIATHIDLSVGSLVAFIGGVCALLMERQGVNWGLAIVISLAVGLIVGVWQGFWVAYVGIPGFITTLAGMLIFRGLATVIVGESVPITSESFRDIARNYLPNVLGWWGPFDGLTIVLGILCIAAFAWSQLRKRARAERVGLVAEPMSLTIIKIVIAALAIGFVTYLLSSSGNADQGGTPVMLVIVGVLVLIYNFILTKTVFGRHVYAVGGNRKAAELSGINTKRVDFTLFVHMGFLSAVAAVCMLSRLASATAQAGMEFEMDAIAACFIGGTAVTGGIGTIPGAVVGAFVMGVINQGLSIMGVDTAIVKTIKGLVLLGAVAVDIMSKRKKS*