ggKbase home page

NECEvent2014_3_3_scaffold_171_21

Organism: NECEvent2014_3_3_Bifidobacterium_MSTE12-rel_59_9

near complete RP 52 / 55 MC: 6 BSCG 49 / 51 ASCG 14 / 38
Location: 28640..30502

Top 3 Functional Annotations

Value Algorithm Source
dTDP-rhamnosyl transferase RfbF n=2 Tax=Bifidobacterium dentium RepID=D2Q6T2_BIFDB similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 620.0
  • Bit_score: 1270
  • Evalue 0.0
  • rbh
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27928.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 620.0
  • Bit_score: 1270
  • Evalue 0.0
rfbF; dTDP-rhamnosyl transferase RfbF similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 620.0
  • Bit_score: 1270
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium dentium → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1863
ATGAAATTCGCGAACATACTGTTGGAGACGAATCCTCGCTCTGTCGCCTATCCGGCACTGTACTGCCGTTCCGATCAGCCGGTCGTTTTTGACGAACAACTCGGCGAGTGGAAGATGTTCACCGCCGGAACCTTTGATTTCAGCACGTATTTTAACTCGCTATCCGTGATGAAGCTGAAGCGCTATACGCGTGCGACCAGCTTCACCCTGCATCTCGAGCTTAAGGGCGCCGCTTGCGAAGTGCAGCAGACCATGGGTGACGCCTTTGCCCACGATCCGATTCCCGTCGAAGGTGTTTCCTGCAAGCAGGAGGCGTCCGATGAATGGCAGACCGTCGACCTTGCTCTGAACGTCACCGATGATATGGTCATCATCGGCTTCCTCATTAAGACCGAAGGAACCGTCGCCATTCGCAATGGCTACTATGAGCTGGATATCGATGGCGAGCTCAATGATGTCGAGCTCGTCCTGTCCACCACCACGTTCAAGAAGGAAGCGTTCATAGAACGCAATATCGGCTTGGTCAAGGATCAGATCATCGGCTCCGATGACCCGATTGCCGAACATTTCCACATGTACGTAATGGATAACGGCCGCACTCTGGATGCCGACAAGCTCAGCGGCGACCGTGTCACGGTGGTGCCGAACGATAACGTCGGTGGCGCAGGCGGCTTTACCCGTGGCATGATCACCGCAATGGAACAGGATCCGAAGGCCACCAATATCCTGCTGATGGATGACGATGTCGCGGTATCGCCGGAAAGCATCAAGCGCACTTACAATTTGCTCCGCATTCTCAAGGACGAGCATCGCGAAGACATGATCAGCGGTGCCATGCTGAACTACGAGATCGGTGAGGATCAGTGGGAAGACATTGGCAACATGACCCCGCAGGGCACGTTCGCCGGCTGCAAGCCGGGTCTGCGTTTGACCCTGTTCGATGATCTGATCTACAACGAGATGTACACGCCGACCAAGTGGCAGAAAGATAACATGTATGCCGCATGGTGGTACTGCTGCATTCCGATTTCCGTCATCGAGAGGAACGGTTTGCCACTGCCGGTGTTCGTGCGTTGCGACGACGCCGAATACGGTATCCGTTGCAAGACCGGTTTCATCACCATGAACAGTCTGTGCGTGTGGCACATGTCGTTCTTCGAACGCTACAACGCCGCCGTGGAACGCTATCAGACCACGCGCAACACCATGATTGCCCAAGCGACGTGCGGTATGGCGCCGGATGCTGATTTTATGCGCGAACTGCATAACAACATTCGTTTGGAACTCAAGAAATTCGGGTATGAGAATGCGGAGCTGTGCTTGGATGCCTTCGAGGACTTCCTGAAGGGGCCGGCGTTCATCAAGAAGCCCGGGCAGTCCGAACAGAGTTTTATGGCGGCGAATCGCAACAAGGAGCAACTCGTCGATTTCGAGACCCTTCAGGAACAGGCTGACAAGGATCCGGAGCTGTCCGGTTTCCGTGTCGAAGATGTCGATCGTCAGCTGATCGACGGCGACAAGCCGCGTAGCCTGAAAGAGCGTCTGGAGGATCTGATTACCGACAACAACCAGCGTTACCTCAGGAAGGGCGGTTCCGGATATGCCGTTATCCCGTTGCAGGGTTGGTTGTATCCGGCCGGCGTCATTCGTGGTAAGCACAAGTTGGTGGTCTTGGATTGGTATAACCGCAAGGGGGCTATCCGTACCAAGGATGTGAACCGCTATGCGCAGATCAAGAAGCGTTATGCGAGGGATCTTAAGTACTACAAGGCCAACATTGAACGTCTGCGTAAGGAATACGCCGATGCGCGCGCCGAGCTGACTTCGGTGGCGTATTGGAAGCATTACCTGAAGATGGACTGA
PROTEIN sequence
Length: 621
MKFANILLETNPRSVAYPALYCRSDQPVVFDEQLGEWKMFTAGTFDFSTYFNSLSVMKLKRYTRATSFTLHLELKGAACEVQQTMGDAFAHDPIPVEGVSCKQEASDEWQTVDLALNVTDDMVIIGFLIKTEGTVAIRNGYYELDIDGELNDVELVLSTTTFKKEAFIERNIGLVKDQIIGSDDPIAEHFHMYVMDNGRTLDADKLSGDRVTVVPNDNVGGAGGFTRGMITAMEQDPKATNILLMDDDVAVSPESIKRTYNLLRILKDEHREDMISGAMLNYEIGEDQWEDIGNMTPQGTFAGCKPGLRLTLFDDLIYNEMYTPTKWQKDNMYAAWWYCCIPISVIERNGLPLPVFVRCDDAEYGIRCKTGFITMNSLCVWHMSFFERYNAAVERYQTTRNTMIAQATCGMAPDADFMRELHNNIRLELKKFGYENAELCLDAFEDFLKGPAFIKKPGQSEQSFMAANRNKEQLVDFETLQEQADKDPELSGFRVEDVDRQLIDGDKPRSLKERLEDLITDNNQRYLRKGGSGYAVIPLQGWLYPAGVIRGKHKLVVLDWYNRKGAIRTKDVNRYAQIKKRYARDLKYYKANIERLRKEYADARAELTSVAYWKHYLKMD*