ggKbase home page

NECEvent2014_3_3_scaffold_333_12

Organism: NECEvent2014_3_3_Bifidobacterium_MSTE12-rel_59_9

near complete RP 52 / 55 MC: 6 BSCG 49 / 51 ASCG 14 / 38
Location: 11354..14920

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifido similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2386
  • Evalue 0.0
dnaE; DnaE DNA polymerase III alpha subunit (EC:2.7.7.7) similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 999.99
  • Bit_score: 2382
  • Evalue 0.0
DnaE DNA polymerase III alpha subunit n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q5G4_BIFDB similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 999.99
  • Bit_score: 2384
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium sp. MSTE12 → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3567
GTGCAACTGCATAACCATACGCACTATTCGCTGCTCGACGGCGCTTCGAAGATACCGGATCTGGTCAAACGCGCCAAGGAACTGAACATGCCGGCCGTCGGCATCACGGATCATGGCAACATGCATGGCGCCTATGAGATGTGGAGCACCGCAGTCAATGCGGGCATCAAGCCAATCATCGGCATCGAAGCCTATGTCACGCCGGAAACCGCACGCCAGGACCCGACCCGAGTGAGCTGGGATACCAACTGGAACCCGGATCTTGACCCGAACCATCGCAAACGCAACCCCAACGACGTGTCCGGCGGCGGCCTGATCACGCATCTGACCATGTGGGCGGAGACCGACGAAGGCCTCGTGAACCTCATGAAAGCCTCGACCGACGCGAACCTGGAAGGGCGTGTCATGCGTTACCCGCGCATGGACAAGGAGATCCTATCCAAGTATTCCAAGGGGATCATAGCCTCATCCGGTTGCCCTTCGGGCATCATCCAAACCCGATTACTGCTCGGTCAATTCGATGAGGCACTACGTGCGGCGGGGGAGCTGCAGGACATCTTCGGCCGAGACAACTTCTACATCGAATTCATGGACCACGGGCTGAATATCGAAAGACAGGTGACCGACGGGCTGCTTGACATCGCCAAAAAGCTCAATGCGCCGTTGCTGGCGACCAACGATTCCCATTACGTGCGTGCGGAGGATGCCGGCGCGCAGGACGCCATGCTGTGCATCAACTCCGGCTCCACCCTCGACGAGCCGGGACGATTCAAGTTCGACGGTACCGGCTACTACCTGAAATCCGCCGAAGAGATGCGTGAACTGTTCAAGGACCTTCCCGAGGCATGCGACAATACGCTGGAGATCGCCGAACGCTGCAACGTGATGTTCGACGATCATGAGGATGGCGCCTTCATGCCTCAATTCGACTGCCCCGAAGGATGGGACGAGACCTCGCTGTTCCTGAAGAAGGTCGAAGAGGGCCTGGAAAAGCGTTATGACGGCAATCCGCCGATCGAGGTGCTCAAGCAGGCCGACTACGAATGCGGCGTAATATGCCAGATGCAGTTCTGCGGTTACTTCCTTGTCGTGGCCGACTACATCAACTGGGCCAAGACGCACGGTGTGATGGTGGGGCCTGGCCGTGGTTCCGCTGCAGGCGCCATGGTGGCATACGCCATGGGCATCACCGAACTCGACCCGATCCAGCACGGTCTGATTTTCGAACGCTTCCTCAATCCGGAGCGAGTCTCCCTGCCTGATATCGACGTGGATTTCGATCCGGACGGCCGCGGCCGCGTACTCGACTATGTCGGCGAGAAATACGGTCGTGACAAGGTGGCGCAATGCGTGATCTACGGCACCATCAAAACCAAGCAGGCCTTGAAGGATTCCGCACGCATCATGGGCTTCGACTTTTCCATGGGCGAGCGCGTGACCAAGGCGTTGCCACCGGCGCAGACGGGCGGCAAGGACATCCCGTTGCACGATATCTTCGATCCGACCTCGAAACGCTATGCCGAAGCGCGTGAGTTCCGGGAGCTGTACGATTCCGATCCGGATGCCAAGCGTGTGACCGATGAGGCGATGGGCATCGAGGGTCTGATTCGTCAGACCGGTGTGCATGCCTGCGCCACCATCATGGGTAGTGAGCCGATTACCAACACCTCGCCGCTATTGGAACGTACCGACGGTACCGTCACCACTACGCTCGAATATCACACATGCGAAACGCTGGGTCTGGTCAAGATGGACTTCCTCGGGCTCTCCAACTTGACGGTGATTCGTGACACCCTGAACAACATCGAGGCGAACGGCAAGGACCGCATCGACCATACCAGGATTCCTTTGGATGACAAGGCCACGTACGAGTTGCTGTCGCGAGGCGACACCCTTGGCGTGTTCCAGCTCGATTCCGACGGCATGCGCTCGCTGCTGAAAACGTTGAAGCCCAGCAACTTCAACGATATCTCCGCGTTGATCGCCTTGTACCGGCCGGGCCCTATGGATATGGATTCGCATACCAACTATGCGAAGCGTAAGAACGGCCTGCAGAAGATCACGCCGATTCATCCCGAAGTGGCCGAACCGCTCAAGGAGGTGCTTGACGAGACCTATGGTCTGATCGTGTACCAGGAGCAGGTGCAGTCGGCCGCGCGAATTCTGGCGGGTTACTCTTTGGGTAAGGCAGATGTGTTGCGCCGAGCCATGGGCAAGAAGAAGCCGGAAGTGTTGGCCAAGGAGAAAATCCCGTTCTTTGCGGGCATGAAGGAGCATGGCTACTCGCAGGAGGCGGCCCAGGCCGTGTGGGACATTCTGGTGCCGTTCTCGGGGTATGCGTTCAACAAGGCGCATTCCGCCGCATACGGTTTGATCTCCTATTGGACCGCGTATCTGAAGACGCACTATCCGGTGGAATTCATGGCCGCCCTATTGCAGGGCGCCAGCACCAATAAGGACAAGACCGCACTGTATCTCGGCGAGGCGCGGCGCATGGGCATTCAGGTGCTGTCTCCGGATGTGAATGAGTCGGTATTCGAATATTCGGCGGTCGGCGATGTCGTGCGATTCGGTCTCGGTGCCATCCGCAATGTCGGCAGGAACGCCGTCGATGACATCATCAAGGAGCGCGAGAGCGGTCATGGCAAGTATGTGAACTTCCCGGATTTCGTGCGTCGCGTGCCGTTGAGTGCCTTGAACCGTCGTCTGGTGGAATCGTTGATCAAGGCCGGAGCCTTCGATTCGGTCGATCCGAACCGTCGTGCGCTGTTCACCATTCATGAGGCTGCCATCAATTCGGTGGTGGGCATCAAGCGCAAGCAGGCGGAAGGCCAGTTCGATCTGTTCTCCGATCTGGATGATTCGGCCGAACAAGACGGCATGGGAGACGCCATGGTGAGCGTGCCGGATGTGGAGGAATGGGATAAGAAGACCAAGCTCAACTTCGAGCGTGAGATGCTGGGACTGTATGTGTCCGACCATCCGTTGAGCGGCATGCAGTCGGTGTTGTCGAGTCTGCGTGAGATGTCGATCGCGCATCTTATCGATCGCGCCGGAACCATGCCTGACGGGCAGCAGGTCACGGTAGCCGGGCTGATTACGAATGTGGACCGTCGCGTATCGAAGAAGGGCAATCCTTGGGCGATCGTCACCATCGAGGATTTGGAAAGCTCCATCCAGTGCATGTTCTTCGGCAAGGTATATGAAGCGGCCGCGCCGGAACTGGCGGTCGATACCGTAGTGCAGATCCGGGGCCAAGTCGAGCGGCGCGACGAAACCGTGAGTCTGCGTGCCACGGAATTCCAGGTACCGACCTTGGAGGCGGAGGATGAGAGGCCGCTCGTGATCACGCTGCCGCAGGTTGCACTGAACCGTGATCATGTGATGCGGCTCGGGCGGATTCTGAACGACCATCCCGGCTATTGCGAGGTGAGACTTGCCATCATGGACGATCAGGGCAACGCCAAGGTGCTGACCTTCGGCGATCGCTTCCGCGTGAAGCGGGACACCTCCCTGTTCGCCGAGATCAAGATTCTTTTCGGTCCCAGCTCCCTGCCCATGGCCTGA
PROTEIN sequence
Length: 1189
VQLHNHTHYSLLDGASKIPDLVKRAKELNMPAVGITDHGNMHGAYEMWSTAVNAGIKPIIGIEAYVTPETARQDPTRVSWDTNWNPDLDPNHRKRNPNDVSGGGLITHLTMWAETDEGLVNLMKASTDANLEGRVMRYPRMDKEILSKYSKGIIASSGCPSGIIQTRLLLGQFDEALRAAGELQDIFGRDNFYIEFMDHGLNIERQVTDGLLDIAKKLNAPLLATNDSHYVRAEDAGAQDAMLCINSGSTLDEPGRFKFDGTGYYLKSAEEMRELFKDLPEACDNTLEIAERCNVMFDDHEDGAFMPQFDCPEGWDETSLFLKKVEEGLEKRYDGNPPIEVLKQADYECGVICQMQFCGYFLVVADYINWAKTHGVMVGPGRGSAAGAMVAYAMGITELDPIQHGLIFERFLNPERVSLPDIDVDFDPDGRGRVLDYVGEKYGRDKVAQCVIYGTIKTKQALKDSARIMGFDFSMGERVTKALPPAQTGGKDIPLHDIFDPTSKRYAEAREFRELYDSDPDAKRVTDEAMGIEGLIRQTGVHACATIMGSEPITNTSPLLERTDGTVTTTLEYHTCETLGLVKMDFLGLSNLTVIRDTLNNIEANGKDRIDHTRIPLDDKATYELLSRGDTLGVFQLDSDGMRSLLKTLKPSNFNDISALIALYRPGPMDMDSHTNYAKRKNGLQKITPIHPEVAEPLKEVLDETYGLIVYQEQVQSAARILAGYSLGKADVLRRAMGKKKPEVLAKEKIPFFAGMKEHGYSQEAAQAVWDILVPFSGYAFNKAHSAAYGLISYWTAYLKTHYPVEFMAALLQGASTNKDKTALYLGEARRMGIQVLSPDVNESVFEYSAVGDVVRFGLGAIRNVGRNAVDDIIKERESGHGKYVNFPDFVRRVPLSALNRRLVESLIKAGAFDSVDPNRRALFTIHEAAINSVVGIKRKQAEGQFDLFSDLDDSAEQDGMGDAMVSVPDVEEWDKKTKLNFEREMLGLYVSDHPLSGMQSVLSSLREMSIAHLIDRAGTMPDGQQVTVAGLITNVDRRVSKKGNPWAIVTIEDLESSIQCMFFGKVYEAAAPELAVDTVVQIRGQVERRDETVSLRATEFQVPTLEAEDERPLVITLPQVALNRDHVMRLGRILNDHPGYCEVRLAIMDDQGNAKVLTFGDRFRVKRDTSLFAEIKILFGPSSLPMA*