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NECEvent2014_3_3_scaffold_2202_2

Organism: NECEvent2014_3_3_Bifidobacterium_MSTE12-rel_59_9

near complete RP 52 / 55 MC: 6 BSCG 49 / 51 ASCG 14 / 38
Location: 930..1535

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, PadR family n=2 Tax=Bifidobacterium dentium RepID=E0Q6L1_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 201.0
  • Bit_score: 403
  • Evalue 1.30e-109
  • rbh
Transcriptional regulator, PadR family {ECO:0000313|EMBL:ETO98569.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 201.0
  • Bit_score: 406
  • Evalue 1.70e-110
PadR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 201.0
  • Bit_score: 397
  • Evalue 2.00e-108

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Taxonomy

Bifidobacterium sp. MSTE12 → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGGCCATACGAGAGGCATTGCTGGCGTTGCTTGAACAGAGCCCATCCACCGCATATCAACTCAAGCAGGGATTCGAACGCGCCACATCAAGGATCTGGCCATTGAACATGGGGCAGATCTCGACCACCCTGCAACGGTTGCATCGGGATGGGTTGATCGAGGAGGAGCCGAAACGACACAATGAGGCCGTGGTGTGGAAACTGACAGACGATGGACGTCGGGAAGCTGAGCAATGGTGGTTGACACCGGTCACGCTGGAACAGCGTGGCAGGGATGAGCTGGTCATGAAACTCGCCTTTGCCGCAGTCACGCCGGGGGTCGATCTTGATCAGTTGATCGAACGGCAACGTATCTGCCTGCAGCGGCTGTTGCATGACGTCACCCGCGCCAAACGACTCACCGACGCCGATAACATTGCGGCGCGCCTAGTGCTGGATCATCATATCTTCGCCACCGAAGCTGAATTGCACTGGCTGGATACGTTCGACGAAACCATGCTGCGCAATGCCGCGCGCCGCAACCAGACCAGTGTCGAAAATGTCGATGACAAGCAGGAGGCACCGTCCCGTTTCCCTGTGCCTGACCTGCATGTTCACAAGGGCTGA
PROTEIN sequence
Length: 202
MAIREALLALLEQSPSTAYQLKQGFERATSRIWPLNMGQISTTLQRLHRDGLIEEEPKRHNEAVVWKLTDDGRREAEQWWLTPVTLEQRGRDELVMKLAFAAVTPGVDLDQLIERQRICLQRLLHDVTRAKRLTDADNIAARLVLDHHIFATEAELHWLDTFDETMLRNAARRNQTSVENVDDKQEAPSRFPVPDLHVHKG*