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NECEvent2014_3_3_scaffold_1641_3

Organism: NECEvent2014_3_3_Bifidobacterium_MSTE12-rel_59_9

near complete RP 52 / 55 MC: 6 BSCG 49 / 51 ASCG 14 / 38
Location: comp(1675..2079)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal silencing factor RsfS n=2 Tax=Bifidobacterium dentium RepID=D2QAM0_BIFDB similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 134.0
  • Bit_score: 263
  • Evalue 1.10e-67
iojap protein family similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 134.0
  • Bit_score: 263
  • Evalue 3.00e-68
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium den similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 134.0
  • Bit_score: 263
  • Evalue 1.50e-67

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Taxonomy

Bifidobacterium dentium → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 405
ATGCCGGCAGTACAAGATTCCATCGACGCCATCCGCATCGCCGCAGCCGCGGCCGATCGCATGAAGGCCACTGACATCGTGGCTTTCGATGTCACCGAACCATTGGCCATCACCGACCTCATGATGATCGCCGGCGCCTCGAACGAGCGTCAGGTACTGGCTGTGGCCGAGGAAATCGAAAAGGACCTTTATCTGAAAGACGGCAAGCGTCAGCCACGTTCACGCGAAGGCCTGACCGAGGGACAGTGGGTGCTACTCGACTACGGTGACTTCGTGATTCACGTCATGCATCAGGAGTCACGCGACTTCTATCGCTTGGAACGACTGTGGAAGGATTGCCCGAACATCGACCTCCAGCTCGACCACGCGCAGGACACGACGGAGGAAGCCGTCGAAGCGGAATAA
PROTEIN sequence
Length: 135
MPAVQDSIDAIRIAAAAADRMKATDIVAFDVTEPLAITDLMMIAGASNERQVLAVAEEIEKDLYLKDGKRQPRSREGLTEGQWVLLDYGDFVIHVMHQESRDFYRLERLWKDCPNIDLQLDHAQDTTEEAVEAE*