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NECEvent2014_6_5_scaffold_1866_2

Organism: NECEvent2014_6_5_UNK

partial RP 1 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(659..3307)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional antiterminator {ECO:0000313|EMBL:AJH01657.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clos similarity UNIPROT
DB: UniProtKB
  • Identity: 49.9
  • Coverage: 881.0
  • Bit_score: 826
  • Evalue 5.00e-236
PTS system transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 888.0
  • Bit_score: 801
  • Evalue 2.70e-229

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Taxonomy

Clostridium beijerinckii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2649
ATGAATAGGGATGAAATTACTAAGGGAGGTAATAGAAAGGAAAGAGTATACCTTTGTTTAAAAGACCTAACTAAATCAATTAATTTTGATATGGGGGTTTTAGGCTTTGATTCTATGTATATATCTAATCTTCTTAATATTCATAGAACAGGAGTGAGTAGGGAATTAAATAATTTAGTAAGAGAGAATAGAATTATAAAAGTAATGGGAAAACCAGTATTATACTTGGAAAAAAGGTGTTTAGAAGAAATATATGATATTAACTTATATAAAAATATTTTTCCTAGTATTAACAACTTAATTATGTCATTAGATAATAACTCTTTGAAGCAGTCTAATTTTGCTGATAAAAATGAAAATATAACACCCAAAAGCACAGAACCGGATAGTGATATAATTAATAGAGATGCAATTTTTAATGAAATTATAGGTGGAAATGATAGTTTGAAAAAACAAGTAGATCAAGCGAAAGCTGCAATATTATATCCACCTAATGGACTGCATACATTAATTTTAGGACCAACAGGGGTAGGAAAAACAACATTTGCTGAAATTATGTATAAATATGCAGTACATGTAGGAACATTAAGGCAAAATGCTCCTTATATACTTTTTAATTGTGCTGATTATGCAGGTAATCCTCAGTTGTTATTATCCCATTTATTTGGACATGTTAAAGGAGCTTTTACAGGTGCAGATAAAGATAAAAAAGGACTTGTAGATTTAGCTAATGGCGGGATATTATTTTTAGACGAAGTCCATAGACTTCCTTCTGAAGGTCAGGAAATGCTATTTTCTTTAATTGATAGAGGAAGTTTTAGAAGACTTGGAGAATCAGAAAGTAATCATAAAGCAAATATATTAATAATAGCTGCTACAACAGAGGATGTAAATACAAGTATTCTTAAAACATTTTTAAGAAGAATACCTTGTATAATTACGTTACCAAGTTTAGTTGAAAGAAGCTTAAATGAGAGATTAAAGCTTATATTAGATTTTTTTACTGTAGAAGCTAAAAAGATAAAACTTTCATTAACAATATCTGCAGAGGTTATAAAGTTGCTCTTAATTTATGATTGTCCAGGTAATATTGGACAACTAAAGAATGACATTAAATTAATTTCAGCAAATGCTTTTGCTGAAACCGTTATAAATAATGGAAATCATGTAGTTATAGATTTAACTCAAGTATCAAGCAGATTTAAGGATATAATACTTACTTTAGATAACAGAAGAGATGATCTAAATAGTAATTTTGTTATTAATGCTATTAGTGAAGTGACTATCAATGGACATGATGATAATAGATTAGAAAATATTCTTTTAGATAATTCATATAAGACAGAAGGAGATTTCTATGAGAATATATTAAAAAAATCTAGAGAGTATTTTATTGAAGGAAAATCTGTAGACTTAATAAAAAGTGAAATTGCATTAGAAATAGAAAAGTATTTTAGTAAAAACGTAGATAGAAAAAAGCATAAATATATTGAAGACAATGAAGAGGTATTATCTAAAATAGTATCTAAAGATATTTTAGATTCTATAGAAGATATATTTGAAGAGTTTAAGGAATATTTAGAATTTGAGATAGATAAAAAGATTGTCTATAGCTTAGCTTTACATGTAGAAACTCTAATTGCAAAGATTAAAAGTGGTAGTCAGAAATATAACTATAATATAGAGTTTGACAATAGTAGTAATGAATATATTATTTCTCAAAGGATAAAAGAACGGTTAGAAGAAAGTCTAAATATAGTAATTCCTAATGAAGAAGCTATAATAATTTCAATGTTTTTAGCAGCGGTTAAAGAAACTAAGAAAGAGGACTACATAGGAGTATTAGTTGTAGCTCATGGAGAAAGTACTGCTACAAGCATGGCTAATGTAGCAAATAGGCTTTTAGGGGTTAATCACGCTAAAGCTATAGATATGTCATTAGAAGAAAGTGTTCAAAGTGCATTTGAAAAAGTTCTTGAGAAAGTAAAGGAAATGGATAATGGTAGAGGAGTACTATTACTTGTAGATATGGGATCATTAACTACTTTTTCTCAAATGATAACAGATAGTACTGGTATTATTACAGGAGTAGTTAAGATGGTAAGTACTCCAATGGTTATAGAAGCCACTAGGAAAGCCATGTTGCCTAATATGAATTTAAACACATTAATAAAAGAAGTTATCAGTATGAGTCAATATATAGGTAAAAGTGTATCTAATTATGAGAATAAAAATGAGATTGAAGTAAACACAGAAAAAAATTATTGTTACAACTCCATTTTATGTGTGAATGAAGAAAGATTCTTAGAAGCATTAGAACAAACAACAACATTTTTAAATACAAAAAAAGCATATGAACTTTTAAATAATATTTTAAATAATATAACTGTAAAATTAAGTATAATTCATAATGATGGATTAACTGTAAAATTCTTATTTCACTGTATTAGTATGCTTGAGAGAGTTATCAAAAATGGTGCTTTAGAGTATAAAAATTTTAGGAAAATAAAAAATGATAAAATAGATTTATTCGAGTTAGTAAAAACCTCATTTCAACCTGTAGAAAATTCATTTGGTATAACTATACCTGATAGTGAATTAGCATATATAGTAGAATTAATTGACATTCATATTGATGAAGCGAGGTGA
PROTEIN sequence
Length: 883
MNRDEITKGGNRKERVYLCLKDLTKSINFDMGVLGFDSMYISNLLNIHRTGVSRELNNLVRENRIIKVMGKPVLYLEKRCLEEIYDINLYKNIFPSINNLIMSLDNNSLKQSNFADKNENITPKSTEPDSDIINRDAIFNEIIGGNDSLKKQVDQAKAAILYPPNGLHTLILGPTGVGKTTFAEIMYKYAVHVGTLRQNAPYILFNCADYAGNPQLLLSHLFGHVKGAFTGADKDKKGLVDLANGGILFLDEVHRLPSEGQEMLFSLIDRGSFRRLGESESNHKANILIIAATTEDVNTSILKTFLRRIPCIITLPSLVERSLNERLKLILDFFTVEAKKIKLSLTISAEVIKLLLIYDCPGNIGQLKNDIKLISANAFAETVINNGNHVVIDLTQVSSRFKDIILTLDNRRDDLNSNFVINAISEVTINGHDDNRLENILLDNSYKTEGDFYENILKKSREYFIEGKSVDLIKSEIALEIEKYFSKNVDRKKHKYIEDNEEVLSKIVSKDILDSIEDIFEEFKEYLEFEIDKKIVYSLALHVETLIAKIKSGSQKYNYNIEFDNSSNEYIISQRIKERLEESLNIVIPNEEAIIISMFLAAVKETKKEDYIGVLVVAHGESTATSMANVANRLLGVNHAKAIDMSLEESVQSAFEKVLEKVKEMDNGRGVLLLVDMGSLTTFSQMITDSTGIITGVVKMVSTPMVIEATRKAMLPNMNLNTLIKEVISMSQYIGKSVSNYENKNEIEVNTEKNYCYNSILCVNEERFLEALEQTTTFLNTKKAYELLNNILNNITVKLSIIHNDGLTVKFLFHCISMLERVIKNGALEYKNFRKIKNDKIDLFELVKTSFQPVENSFGITIPDSELAYIVELIDIHIDEAR*