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NECEvent2014_3_3_scaffold_4652_1

Organism: NECEvent2014_3_3_Clostridium_sporogenes_rel_30_4_partial

partial RP 23 / 55 MC: 1 BSCG 18 / 51 ASCG 3 / 38
Location: comp(3..974)

Top 3 Functional Annotations

Value Algorithm Source
Putative PAS/PAC sensor protein n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J1J4_DESRM similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 303.0
  • Bit_score: 318
  • Evalue 8.90e-84
PAS modulated sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:KDR94428.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Pepto similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 300.0
  • Bit_score: 346
  • Evalue 4.30e-92
putative PAS/PAC sensor protein similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 303.0
  • Bit_score: 318
  • Evalue 2.50e-84

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Taxonomy

[Clostridium] litorale → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 972
ATGAATGAAAATAACTTTACAGATATTTTTCCTATTACCGTAAAACATAATAGAATAAAAGACTGCGAAAATGCTTATGAGGATTTAATGGAAGAATTTAATGCTATTCTCGACGCCTCAAATGATGGAATACATATTACTGATGGAAAAGGAGTAACTTTAAGATTTAATAAATCCTGTGAAAGAATTGATGGTGTAAAGGCTGATTATGTAATAGGAAAACATATGGAAGAATTAGTAGCAGAAGGTATATATTCAGAGTCCGTTGCTTTAGCTGTAATTAAAGAAAAAAAACAAATTTCCATGCTCCAACAAGTAAATGGTAAAGAAGTTATAGGAACTGGAACTCCAATATTTAAAAATGGAGAATTATATAGAATTGTCATCAATTCTAGAGATATAACTGAATTAAGGGATTTGAAAAGAGGTCTCGAAGAAGCTAAATTAATCAACAAAAAATATCAACAGGAATTGGATATTATCAGCTCTAAGGATAAAGCAAAGAATAGCAATATCATCTATAATAGTGACAAGATGGATAAAATAATAGATCTAGCCCTTCGGGTTGCTAAAGTTGATTCAACAGTTCTTATTGAAGGTGAGTCTGGTGTTGGTAAGGGAGTTTTAAGTTACTTCTTACACAACAACAGTCTTAGATATAATAAGCCTTTTATTAAAATTAATTGTGGTGCAATACCCGAGAATCTTTTAGAATCAGAATTATTTGGTTATGAAAAAGGCTCTTTCACTGGTGCAAATAAAGATGGAAAAGTGGGATTAATTCAATTAGCAGATAAAGGAACTTTATTTCTTGATGAGATAGGAGAGTTACCACTTAACTTACAAGTAAAATTATTAAATGTAATACAAAATAAAGAATTAACTAAGGTTGGAGGCACAACTACTATTCCTATTGATATTAGAATTATTGCAGCTACTAATAGAAATCTACAAGATATGGTAAAAAATAAA
PROTEIN sequence
Length: 324
MNENNFTDIFPITVKHNRIKDCENAYEDLMEEFNAILDASNDGIHITDGKGVTLRFNKSCERIDGVKADYVIGKHMEELVAEGIYSESVALAVIKEKKQISMLQQVNGKEVIGTGTPIFKNGELYRIVINSRDITELRDLKRGLEEAKLINKKYQQELDIISSKDKAKNSNIIYNSDKMDKIIDLALRVAKVDSTVLIEGESGVGKGVLSYFLHNNSLRYNKPFIKINCGAIPENLLESELFGYEKGSFTGANKDGKVGLIQLADKGTLFLDEIGELPLNLQVKLLNVIQNKELTKVGGTTTIPIDIRIIAATNRNLQDMVKNK