Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
greA; transcription elongation factor GreA | similarity |
KEGG
DB: KEGG |
52.8 | 144.0 | 144 | 2.90e-32 | tpd:Teth39_0317 |
Transcription elongation factor n=1 Tax=Clostridium leptum DSM 753 RepID=A7VST5_9CLOT (db=UNIREF evalue=2.0e-27 bit_score=124.0 identity=51.94 coverage=85.6164383561644) | similarity |
UNIREF
DB: UNIREF |
51.94 | 85.62 | 124 | 2.00e-27 | tpd:Teth39_0317 |
coiled-coil (db=Coil db_id=coil from=9 to=38 evalue=NA) | iprscan |
interpro
DB: Coil |
null | null | null | null | tpd:Teth39_0317 |
seg (db=Seg db_id=seg from=2 to=16) | iprscan |
interpro
DB: Seg |
null | null | null | null | tpd:Teth39_0317 |
GREAB_2 (db=PatternScan db_id=PS00830 from=116 to=132 evalue=0.0 interpro_id=IPR018151 interpro_description=Transcription elongation factor, GreA/GreB, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | tpd:Teth39_0317 |
GREAB_1 (db=PatternScan db_id=PS00829 from=15 to=46 evalue=0.0 interpro_id=IPR018151 interpro_description=Transcription elongation factor, GreA/GreB, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | tpd:Teth39_0317 |
greA: transcription elongation factor GreA (db=HMMTigr db_id=TIGR01462 from=3 to=144 evalue=2.3e-58 interpro_id=IPR006359 interpro_description=Transcription elongation factor GreA GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 2.30e-58 | tpd:Teth39_0317 |
GreA_GreB_N (db=HMMPfam db_id=PF03449 from=2 to=72 evalue=2.5e-22 interpro_id=IPR022691 interpro_description=Transcription elongation factor, GreA/GreB, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.50e-22 | tpd:Teth39_0317 |
GreA transcript cleavage protein, N-terminal domain (db=superfamily db_id=SSF46557 from=3 to=77 evalue=7.6e-21 interpro_id=IPR022691 interpro_description=Transcription elongation factor, GreA/GreB, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: superfamily |
null | null | null | 7.60e-21 | tpd:Teth39_0317 |
GreA_GreB (db=HMMPfam db_id=PF01272 from=80 to=146 evalue=3.5e-20 interpro_id=IPR001437 interpro_description=Transcription elongation factor, GreA/GreB, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 3.50e-20 | tpd:Teth39_0317 |
no description (db=Gene3D db_id=G3DSA:1.10.287.180 from=1 to=73 evalue=2.7e-18 interpro_id=IPR022691 interpro_description=Transcription elongation factor, GreA/GreB, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: Gene3D |
null | null | null | 2.70e-18 | tpd:Teth39_0317 |
FKBP-like (db=superfamily db_id=SSF54534 from=77 to=146 evalue=4.8e-15) | iprscan |
interpro
DB: superfamily |
null | null | null | 4.80e-15 | tpd:Teth39_0317 |
no description (db=Gene3D db_id=G3DSA:3.10.50.30 from=73 to=146 evalue=6.9e-13 interpro_id=IPR001437 interpro_description=Transcription elongation factor, GreA/GreB, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: Gene3D |
null | null | null | 6.90e-13 | tpd:Teth39_0317 |
Transcription elongation factor {ECO:0000256|RuleBase:RU000556}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" |
UNIPROT
DB: UniProtKB |
100.0 | 146.0 | 282 | 4.50e-73 | K2FH21_9BACT |